| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0185 |
|---|
| Symbol | |
|---|
| ID | 3677985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | + |
|---|
| Start bp | 213811 |
|---|
| End bp | 221556 |
|---|
| Gene Length | 7746 bp |
|---|
| Protein Length | 2581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637715266 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320460 |
|---|
| Protein GI | 75812843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0318462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTC AAGCTAAACA TTTTGACACT AGATTAAATC AATGGATTCA TACAGATGGT
AATACAAATA ATCCAGATTC GCTGTTAAAG GAAGAACTTA ATAATACCCT ATTAGAATAT
TTCTTTCCTG GGGTAAACTT TTCGTTCGGG CATATGGACG AAAAGTCTAC TGTGGAACAA
TTAACTAATC ATCCTGAAGG TAATAAATTA TTATTATCAT CAAAAACTCG GTTATTATAT
GGCCCCGAAG AATGCCTAGA TACAATTAGA CAATTATGCC CTGATAACAA AGATAGAGGT
GCTTACGGGT CTATCTTTCT TGGTTCATGT AGAAATGCTG TCAATAAAGA GTTAAATATT
TTAATAGTTG ATGATAATAA TGGTGAAAAT GGCGGCATTA TCAGTAATGA CCAAGCATAT
CGGTTAACAG GAGACTGTTA CGGACAAATA TCAAAAGAAC TGTATCACGA ATTAACCAAA
CATCAAAAAG GTGATAAATA TCGAGTAATT CAGCACCGCT TCGGTTGGAC TGATCGAGAC
GGAGATGATC AGAAATACCG TTTTGGTAAA GGTACACTAC GCCCTGCTAA TCTTGAGCAA
ATCCTCAATT ATCAAGACTC AAATAACTCA ACTAAAATTG ACCTAATTCT TCCCTTATCT
GCGTTCAAGG GAACTGATAA AGACAATCCT AATAGCCCGA CTAAGCCTCA GATTCAACCT
GGACTGTACC GACAAAATAT CTGGCTAGGT GAAAAATCAC AATCTGAACT CGGCAAGACA
GCTATATCGC AGTTACTCGC TTCATTCCCT AACGGACTGA AAGACTTTAC AGAACAGCTA
GAACTTGAAG CCAAAAAGCT TAAGGAAGCA CAGGATGACC CTCGGCAACT TGCACAACTT
TACTGCGAAA AGTACGAGAA GCGAAAAGCC TTTCTTGAAG AACAAGCAAC CACACTAGAA
GAACAAGCAG CAGAAGATCC AACAGTAGCA GAAGAATTAG AAACACTGCG CGATCGCATT
GCTACTGACT CGTTTATTTA CAAACTTATC AAAGCTGACC TGCAAGGAGA AAGGCAACTT
CTCGAAACTG AGAAGGTACA GCGCGAACTC GCCCGATTCG TCCAAAACGA GTGGAAAGAA
ATCGCCATTG GCAAGACGTT AACGTTTGAG CGAGCAATGG TCATTCCCTC CAAAGACCTG
CAAAATGGGG AAATTTCTAT ACCGCATTAT CAAGACGGGG AAGAAGTTCT CAACTTCCGC
TCCCCTTTCC TCAACTCAAA TGGTCTGTGC GTCTCAACTA ACAAAATTGT AGAAGATATC
CTTGGGCCTG ATGGTCAACC TCTCGCTGGT GCGATCGCTG TCTCGGACGA AACAAGCGAT
CGCATTTACA ACCGCCTCAA TGAGCAAATT AAATCTATCC TGCCAGAAGC TCAAGGAAAA
AATATCCAGT TAGCAGGTAT TGAAAATTAC TTAGACCAAA GTATTAGTAA GCTCGAAACT
AGGGATAAAA TAGAGTTTAC TAACAAATTT AATCAGTATA TTTTAGAACT AAAATCTGCT
GGTTATGAAT TAGAGATTCT TCCTCAAGAG TCCGAACAAG AGCGCCAGGC ACGCGATTAC
GATGGTGATT GTATCGGCTT CGAGCGGGCA AGCAAGTATC CCAACCTCAC CATCGAAGCA
AAGGAGCGTA ACCTTCCTGA AAACGCCTAC GCTCCAACTG TCAAACTTAA AAAACAATCT
TTTTACCAAG AAGATGGCTC TCAGGCAGAA TTTGAGGAAA TCGCCATCCA CATGAGCGAT
GGCATTAGTG TGGGTGTTAT CAACAATCAC CTTACCGCAA TTGAGGCGTT AGAGTCAGAA
ATTACGATTC TAAAAAACTT TGGTAGTGAA AAAGACTCAA TAGAGTACGT ACAGCAGGTA
GCCAAACACT ACGAAGATTT ATTCAAAACA GAAGTCTGGG CAAAATCCAA GGGTATTGAA
GGGAAGGAGA TTCCGACCAA GTATCGCAGT TACATGGAAG AGTTCATCAA AACTGTTCGA
CAAGAACCCA CCAATACACT AGTGGCGATG AACATTAATA CCCAAATGTA CCGTGAAATG
ATTGCTGAGG CAGCATTTCA AAATCAAATT GCAGTTGACC TTTTTAAGAG TGCCAAAAAA
CCCGAAATTG AAATTATTCG CAATAATAGT CGGATTCTTC ACCGTGAAGT CAACTATATT
AAGGATAAGA AGAAAGATGT CTATATTGAC AATACAATTC AACCGACAGG ATACTCACCT
GTTGAGTTAC TAATTGCTCA AACCAACCAG TATTTTGAAA AAGCTCGCCT CGAATCGCGT
GAAATCGTTC AATTTCAAGC TTTATTTAAA GGGGTTGAAT TTTCTCACGA ACAGCGATTA
AGAGCTACCC TCATCAAAAA AGAATTCGAC AAATCATTCA ACCGAGCAAG TGAGCTATCT
AAACAAAAAG AAACTGAAAA AGGGCCATCT GCAAATATTA CCCTTGCTAA TGGTAATCAA
GTAAGTATAA CTAATCTTCT ACAGTATGAT AATGAATTTA TCTGGAAAGC TAATACAATT
ACGATAAAAG TATCAGAAAT ATCCGAAGAT AAACGCAACA ATAACCGCCC GCATAAATAT
TTAGTTTATG CTCAAATTAA CGATGGAACT GAGAATGGTA AACCCAAGTT TAGAAAATTA
GGAACACTGG CAAGGGAGCA AGAAAATAAA CTCGAAGAAA TAGGAATTAC ACTTGGGCAA
GAAGTAAAAT CTAACAAAAT ATTATTCCAG CCTGAATTAA GCGAAGGTCA AATTAAACTT
CTTTACCAAA AAGCTTACCA GATAGCAGAG GAATTTTATA ATTCGATTTC AGAAGACCAA
AAGCTAACAA TGGCAGCTGC CACCTGGGCG GTATCAACTA CTCGTGAGAG TAGTAATGAT
AAAAGTAGCG ATCGCCAGAA CAAAGTTTCT AATTTCGCCT TTGCTGCCTT TCCTCAAGAG
ATTGTTAGTC AGTTAGATAT ACTCAAGTTT ACCGAGTTTA GTATCACTGG ATTTGACCGG
AATAGTGAGT TTTTTAATGA AAATCAACCT CAGAGTATTC GATTTAATCT AGCTGAAGAT
GGAAAAAGCG TAATTGAAAT TCAGAATCAA GAGGGTAGTT ACAAAACATT TGGAAATATT
GAACAAAGTA ATGCTCGGCT GCCAATTGGT ACTATTGCTA TTGGCAGTGT CGAAAAAGGT
GAAGTATATA CCACCTCTGT TACAACCAAA GTACCTGGAC TACCAGAACT AACTTTCAAG
GTAGGCGAAG TTAATAAGTT TGGGAATTCC CAGAGGTTTA ATAATGAACC TGTAATGTTA
ACAATCGAAA AGGTTGACCT GATTCGGGAA GACTATACTA TCTATCTTCA AAATGGTAAT
AAACCTGAAA AACTAGGCAA TATTGATAAA GAATCAATCA AAGAAGGTAT TGCTCAAGGC
TGGCTAGCAG AAAAGCCTGG GAATGGGCAA AAGTTACATC TTAAAATTCA AACTATCATC
ACTGGACAAA ATGCCTATGC CATAGCAGAA ACATCTCAAA GTAATCTGTT ACGAATTAAT
ATTACGAATC CAAAATACAA GAAACAGGAG ATTAACAACC AAGCATTTCA AGAAACTTTA
GTTCGTGCAT TTGATAAAAA GCACGTTTAT ATTGCTAAAA TTGGCGACCA ATCACTCGGT
ATTATTGGTC AGCATAATGA ACGTCTCGAA GCTGATTTAA ATAAAGGGAA TATACAAAAA
CAGTGGCAAA GGAAAGAAAG TAGCACTGTA CAAAAATTAA TTGATACGGG TATTATTCGC
CAAAACCAAC AACGAACCAC TATCCCTGTA CAGATTACCA GTAATGAAAG TACTTGTAAA
ATAATTATTA ATCCAGAAAC AGTACAATAT CCCGATAAAT GGGTTAAACG CAGTCAGCTT
ATAAGTAATG AAAAGCCTGT CAGAGACGAG CAGCAAGAAG AACGCAACCA AATACTCGGT
AAAATTAACG AACGCCCTAC AATCATGTTC CAAGATAAAG AGCAAAAATT AGTAGGGCTT
TTAGGATTAG CAGTTGATGA AAATATAGCC GAAAAAACCA AAAAGTATCT CGAAAAAGTA
GGAGTATCAT ACGAACAGCT TCCTATATCA CAAGCTCGGT TAGAAGCCAA AAAAGGAATG
ACTGTATTCG TACTTGATGA AACTACTATC AGCAGCGAAT TAAGACAAAC CTTTATTAAC
CGTGCTGGTG GTCATATCAA AAGTGCAGAT ACACCCTCAC AACCCACTCC AATCATTCCC
CAACAAACTG TATATTTTTA TAATCCAAAT CAACAATATA CTTTCCCGGA TGGAGCGCAG
GCAGAAACTC AAGAAGCTTT TGGACTAGTA GTTCCTGCAC AAGACGCGAT CGCTGTAGCC
ACTTGGTTAG AATCAAAGTC TACTGAAAAC GATTATTTTA TTGAGAGTAA CACAGCTACA
TTTATTTTTA ATAAAAATGA GATTAGTGAG AAAATAACCG AAGAATTAAA TACTTTGCTT
GGAGAAGCTA TTAATATTGG TGAAGTTGAT GGTTTTGACC GCTATGAACA GCTTAGTGCA
GAGTTAAATC AAAAAGTTGC AACTGAAGGT AGTCTTTTAA AATTAAACCA AATTCCAGAA
ACTAGTGAGT ACCAAAAAGC TTTACAAGCA CTTCCTAACC GTCCAAGAGA ACTGAATCAA
GAAGATTCTC CAGTACCAAT TATTCCTGCT AAAGCTTTAC CAGAAAAGAA TACAACTAAT
ATTCAATCAA ATACTAACGC CACAGTTGGA GGAATTTCAC AAGTCTATCA AAACGCGGTT
GAGATACAAG TATTAACGGA TATACAAGCA GAAGCTAAGA ATCAACCAAT ATTACTACCC
AACTCGCGTC AAGCCGATCC AACTAAAGCT ATCGAAATAT TGGGTAAGAT AAGCGAGAAA
AAAGTAGAAC AGCTGCGATC GCATCTTGAA ACCCACTTCA AACCCATACT TGAAAATGAC
AAATCTAACT ATGCACCACT GAGACAAGTC GCCTGGGTCG GTGCAAAATG GGATTTGAAG
GATAAAGACT TCAAGCCAGG GGTACAGGAC GACAAGTTGA TGGAACTTGT TAAGCAAGTA
TATCCTGACG CTGATATTGT GCTGGTAACT TATTCTGAGA ACCCCGGTGC TGGCATTAAC
TACCACCGCG ATGACTCCTA CGCCGCGACG GAAGCCCGCA GCATTAATAT CGGAAATTCT
GACTGGGGCT ATCGCGCTGC TAAGGAACGA ATGGCATGGA CTAGTGAAGA GAATCAGGAC
GCACCATACC AAGAGTTTAA ACTTGAGTCG GGTACAGTAA CCCGCTTTAA CTGCAAGAAC
GAACACGCTG CACTGAATAC TGAGGTTGGC AGATGGTCTA TCAACATCTG GTCAATTAAA
AACGATTTGG GCAGAGAAAA CAGCGTTCGC CAAAAATTTG AGAACTTCCT CACCTCAAAC
CAACCTCCGC GTGCGGTAGT CCAAAGCAAC AACAACCTCA CCATCAAAGC TAACGAGTGG
ACACCAGGGG GAGAAATTAA AGTAGAGCGC AGTTATACCA GCCTCAGAGA AGTCGCCCAA
AACATACCCT CACACCCTTC AAACCAACTA ACGGTCGAAG AAATTATCGC CATTGGCAAT
TCCACTGCGG CACGCGCTGC TAATTCTCAA ATTCCATACA ACCCGACTAT ATCTGGCAAA
CCAATACCAA TGGTCTATTC GCTGCATCTG CACGGCGAAG CTGCCACGAT ACCAGTTGAT
ACAACCATTG ATGCTATGCG CGGACACGGT AGGATACACA CTACCAGAGG TGTAGACTAC
CAAAAAACTT ATGGTATCAA TGAGGGAGAT ATTGCGATCG CCCAAGGTAA AAACGGCGAG
CAAGTTGCTT TTCGGGTAGG TAAGCAATAC AAAATTACCA CCCAAATGAT TCAAGACCCA
AGTTACCAGC AAGCCTGGGC GAGATGGGAG AAGCATTCAC CAAAAGAACT TACCCAAACT
CAAGCGAGTA AAAGTCAAGT ATATGGCTTA TTCATGGAGC CACTAGGAGA TTATGTCAAT
GACAAAATTG TTCCGTTCCC AACCATCCAA AAACAACCTG CAACTCCAGT AAATATCAGC
CCCGACTCCA AAGATGGGCT GGGAGTAGCA CTCAGCCTTG CCACTGCACT CGCCAAAGAA
CAAGGCAAGC TGCAAAACGA TTACCAAGTT TCAGTCAACA ATGATCCAGA AGCCCCTGCT
GGGCAGTATG GATTAGAAAC CCATGTCCAA AAACCTCAAG GGGTAGCATA CGCATCCGCC
GAACACGCAT TTAATCACCA AAAGCAGTTG TATCCATCAG TTGATGAATA CCAGCTAATG
GTAGAAGTGC TTCAGGCTAA ACTCGAACAA CATCCCCGGC TGACTGAGGC GATCGCCAAA
CGCGGGGGAG TCAATTGGTT AGAGAACTGT ACAAACATAA CTAACGCCCA GGATCAACAG
TGGCAGGGTA AGGGTAAAGA ATCCGCTTTT ATTCAAGCCC TTAGCGAAGC GTATATATAT
GTAGTTGCAA AATCACAACA AACTACAGTA CAAACCCAGC AGGACAAGTC CCAACAAACT
GCTCTGCGGC CCACAAATCC ACTGTCCCAA CTCGAACCTA TAAACGCCGC CGTCGCTGAA
CATATGAAAA AAGATATTGC GATGGCCCAA ATAGCTACCC AGTTTATCGG TAAATCAGCT
GCACCCCCTG GTACAGCTTC AAGCACACGA AATTACGAGC AAGCATGGGG GGAACGCGCC
AACACAGGAA ATTACTCAAA AGAAGACATC ATTATGGTGT CCGGATCTGG CCCGTGGCGT
GGAGTAACAA GCAAGCAAAT TGCCCAAACA TTTGAAAATC ACTATAAACC CTTACTTGAT
AAGGCAATAG CAGTGAAAAG CTCTTTTCTA GTCGGAAATG CACAAGGAAC TGACCAATTA
GTTCAAAATT ATCTTCAAGA AAAAGGGTAC AAAGTAGAAC AAACTTCCCA AGGATACGCA
GTATTTAATC CTGTAGAAAA CAGCAAAGTT AGTAGCGATA TTATTTCTAC CAATACACAA
GTATTACATA ACTCATTAAT TGCTAAAGAC AAGAGCATTT TCTCCCCGCA ACAAAGCCAA
CAACCAAATA TTGACCAAGC ACTCGCATCA CCTGCTCAAC CCAAAATGCA GCAAGTTGGA
GCGATGGATA GCATTATCGA GCGGATGAAA GCTAATACAG TGCAAAATCT TCAAGACTGG
TATATGGCGG CTGAAAAACT CGGTAAATCA GACACATATC TCAATAGAAT TCAGGAGGTA
ACTAATTTAT ACATTCAAGA AAATATTAGT CTTGAGAATG CTTTTAAGGC AATGGAACAA
GACATTAAAG AATTAGAAAA AGTTAATGAG ATGACCAGTC TTGCTCAACG TGTAGTTAAG
ACAATTGGAC AAGAAGATAT TAATGGCATT ATGACAGTCC AAACAGAAAA ATATCAGATT
GCTACTCAGA CTCAAAACCA AACTTATTTA GTTAAAGATA AAAAGGATAA TATCTTGCTA
TATGTCAAAC AAGGAAAAAC TCAAGTAAGT AACATTAGTG ATGAAACATT ACAAGATTTT
CAAGTTATGA GCGATCGCAT CAATAATGCA CTCAAAGATG TCAAAAAAAA TTTAGTAGAA
AGGTAA
|
|---|
| Protein sequence | MTIQAKHFDT RLNQWIHTDG NTNNPDSLLK EELNNTLLEY FFPGVNFSFG HMDEKSTVEQ
LTNHPEGNKL LLSSKTRLLY GPEECLDTIR QLCPDNKDRG AYGSIFLGSC RNAVNKELNI
LIVDDNNGEN GGIISNDQAY RLTGDCYGQI SKELYHELTK HQKGDKYRVI QHRFGWTDRD
GDDQKYRFGK GTLRPANLEQ ILNYQDSNNS TKIDLILPLS AFKGTDKDNP NSPTKPQIQP
GLYRQNIWLG EKSQSELGKT AISQLLASFP NGLKDFTEQL ELEAKKLKEA QDDPRQLAQL
YCEKYEKRKA FLEEQATTLE EQAAEDPTVA EELETLRDRI ATDSFIYKLI KADLQGERQL
LETEKVQREL ARFVQNEWKE IAIGKTLTFE RAMVIPSKDL QNGEISIPHY QDGEEVLNFR
SPFLNSNGLC VSTNKIVEDI LGPDGQPLAG AIAVSDETSD RIYNRLNEQI KSILPEAQGK
NIQLAGIENY LDQSISKLET RDKIEFTNKF NQYILELKSA GYELEILPQE SEQERQARDY
DGDCIGFERA SKYPNLTIEA KERNLPENAY APTVKLKKQS FYQEDGSQAE FEEIAIHMSD
GISVGVINNH LTAIEALESE ITILKNFGSE KDSIEYVQQV AKHYEDLFKT EVWAKSKGIE
GKEIPTKYRS YMEEFIKTVR QEPTNTLVAM NINTQMYREM IAEAAFQNQI AVDLFKSAKK
PEIEIIRNNS RILHREVNYI KDKKKDVYID NTIQPTGYSP VELLIAQTNQ YFEKARLESR
EIVQFQALFK GVEFSHEQRL RATLIKKEFD KSFNRASELS KQKETEKGPS ANITLANGNQ
VSITNLLQYD NEFIWKANTI TIKVSEISED KRNNNRPHKY LVYAQINDGT ENGKPKFRKL
GTLAREQENK LEEIGITLGQ EVKSNKILFQ PELSEGQIKL LYQKAYQIAE EFYNSISEDQ
KLTMAAATWA VSTTRESSND KSSDRQNKVS NFAFAAFPQE IVSQLDILKF TEFSITGFDR
NSEFFNENQP QSIRFNLAED GKSVIEIQNQ EGSYKTFGNI EQSNARLPIG TIAIGSVEKG
EVYTTSVTTK VPGLPELTFK VGEVNKFGNS QRFNNEPVML TIEKVDLIRE DYTIYLQNGN
KPEKLGNIDK ESIKEGIAQG WLAEKPGNGQ KLHLKIQTII TGQNAYAIAE TSQSNLLRIN
ITNPKYKKQE INNQAFQETL VRAFDKKHVY IAKIGDQSLG IIGQHNERLE ADLNKGNIQK
QWQRKESSTV QKLIDTGIIR QNQQRTTIPV QITSNESTCK IIINPETVQY PDKWVKRSQL
ISNEKPVRDE QQEERNQILG KINERPTIMF QDKEQKLVGL LGLAVDENIA EKTKKYLEKV
GVSYEQLPIS QARLEAKKGM TVFVLDETTI SSELRQTFIN RAGGHIKSAD TPSQPTPIIP
QQTVYFYNPN QQYTFPDGAQ AETQEAFGLV VPAQDAIAVA TWLESKSTEN DYFIESNTAT
FIFNKNEISE KITEELNTLL GEAINIGEVD GFDRYEQLSA ELNQKVATEG SLLKLNQIPE
TSEYQKALQA LPNRPRELNQ EDSPVPIIPA KALPEKNTTN IQSNTNATVG GISQVYQNAV
EIQVLTDIQA EAKNQPILLP NSRQADPTKA IEILGKISEK KVEQLRSHLE THFKPILEND
KSNYAPLRQV AWVGAKWDLK DKDFKPGVQD DKLMELVKQV YPDADIVLVT YSENPGAGIN
YHRDDSYAAT EARSINIGNS DWGYRAAKER MAWTSEENQD APYQEFKLES GTVTRFNCKN
EHAALNTEVG RWSINIWSIK NDLGRENSVR QKFENFLTSN QPPRAVVQSN NNLTIKANEW
TPGGEIKVER SYTSLREVAQ NIPSHPSNQL TVEEIIAIGN STAARAANSQ IPYNPTISGK
PIPMVYSLHL HGEAATIPVD TTIDAMRGHG RIHTTRGVDY QKTYGINEGD IAIAQGKNGE
QVAFRVGKQY KITTQMIQDP SYQQAWARWE KHSPKELTQT QASKSQVYGL FMEPLGDYVN
DKIVPFPTIQ KQPATPVNIS PDSKDGLGVA LSLATALAKE QGKLQNDYQV SVNNDPEAPA
GQYGLETHVQ KPQGVAYASA EHAFNHQKQL YPSVDEYQLM VEVLQAKLEQ HPRLTEAIAK
RGGVNWLENC TNITNAQDQQ WQGKGKESAF IQALSEAYIY VVAKSQQTTV QTQQDKSQQT
ALRPTNPLSQ LEPINAAVAE HMKKDIAMAQ IATQFIGKSA APPGTASSTR NYEQAWGERA
NTGNYSKEDI IMVSGSGPWR GVTSKQIAQT FENHYKPLLD KAIAVKSSFL VGNAQGTDQL
VQNYLQEKGY KVEQTSQGYA VFNPVENSKV SSDIISTNTQ VLHNSLIAKD KSIFSPQQSQ
QPNIDQALAS PAQPKMQQVG AMDSIIERMK ANTVQNLQDW YMAAEKLGKS DTYLNRIQEV
TNLYIQENIS LENAFKAMEQ DIKELEKVNE MTSLAQRVVK TIGQEDINGI MTVQTEKYQI
ATQTQNQTYL VKDKKDNILL YVKQGKTQVS NISDETLQDF QVMSDRINNA LKDVKKNLVE
R
|
|---|
| |