Gene Ava_C0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0180 
Symbol 
ID3677999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp208746 
End bp210200 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content40% 
IMG OID637715261 
Producthypothetical protein 
Protein accessionYP_320455 
Protein GI75812838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0133176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGGCA AAGATGATGC TGCGATTGTC GATACTAATA TGATGGGAAC AAGGCCAGAT 
GAATTTAATC AGCAGTTTCT CAACATCAAG TACACCAACA AAGCAGTCAA ACGGCAGTGC
GCTCACCTCA TCATCTCAAT CGCACACCGC CCCAACTACC ACGAGCATTT ATCGGACAGT
CAGTACAGTT ATGTAACACG AGAATATCTC AAAGATATGG GATACTTGCC CAAGGAAGAA
TCATCTGTAG CAGCTACCAG TCAGTTTGTT GCAGTACGCC ACCACGATCG CAACCACGAA
CACCTGCATA TAATCGCTTC CCGGATTCGG TTAGATGGTA GTTTAGTTAA TGATTCCTAT
GATTATTTCA GATCCCAAGT CTCTACTAGA CGCATCGCGG CGGAACTAGG ATTGGAAGTA
ACACCGACAA CAAATGAAGC CGTCGCCTCT AGGTTAGAGC AAGAGTACGG AATAATTACA
CTCATCAGTC CCAACCGATC AAAAAGTATT AGAGCAGTCA ACAGTAAGCA CAAAACCCCA
ACAAGTAAGG AAATTATTCG CCAAGCAATA GGAGAAGCCA TTAAGGATAG TCCCACCGTC
TCTACATTCA TTGAACGCCT GGAGGAAAAC AACATTGGAG TATTGCCTAA GATGCAGGGG
GAAGAACTAC TAGGCTTTAC CTACATTCAT AATGATGTAA AAATTGCAGG TTATCAAGTA
TACAAACCTT ATAGCTGGAA CAAACTGCGG TCTGAATATG GAATCATGTA CGACCCAGAT
AAAGATAAAG AAGTAATTCA ACAAGCTAAA GCCAAAGCAA TTGTTCGCAT AAATAGCATA
ATTTTAAGTA ATAATGATTA CTTAAATAAT GATAAACCTA CTAGCAGCAG TACAAGTGAT
AGTAATGGTG ACACCGATAG TAGCTCCAAA ACACTTGTTA GTACATATAC ACTAAACAGT
AATTATCCAA GTGAGATTCC AGTAATACAA TCCAAATTAG AAGATAACCC CACATTGGAA
ACTAATAAGA CCAAGAAAAA AGTTCAACCA CATCCAAAGA AACAGCACCC ACAACAGGAT
ATTTCAGAAG AAAATGGTCT CACTGCTAAA CAATTCCTGG AAGAGCAATC TTCCCCTATT
CCTCCTTCTC TTAACCTTCT GCCTTCTAAT CTCAAACATT TGCCTTCTAT AATCACTGAC
TATATGCTTG TTACCAATAA CTTCCGTATC AAAGGACGGG AGTTGAGTGC CAGCTTAGAT
AACAATACTC TGAGTGTTTG CCGTTATGGG GATAATACCC CTATGATGCA AACCTGCTAC
AGTCAGGGAA ACTGGTACGA AGAGATACCA ACTCGATTAA CAAGAAACGA AATTGAGCAG
ATTGAAAGTC TGCGTTTCTT TACCCAACAA CCATTAATCA ATCAACAGCG ATCGCAAAAA
GGTATTGAGC AATAG
 
Protein sequence
MLGKDDAAIV DTNMMGTRPD EFNQQFLNIK YTNKAVKRQC AHLIISIAHR PNYHEHLSDS 
QYSYVTREYL KDMGYLPKEE SSVAATSQFV AVRHHDRNHE HLHIIASRIR LDGSLVNDSY
DYFRSQVSTR RIAAELGLEV TPTTNEAVAS RLEQEYGIIT LISPNRSKSI RAVNSKHKTP
TSKEIIRQAI GEAIKDSPTV STFIERLEEN NIGVLPKMQG EELLGFTYIH NDVKIAGYQV
YKPYSWNKLR SEYGIMYDPD KDKEVIQQAK AKAIVRINSI ILSNNDYLNN DKPTSSSTSD
SNGDTDSSSK TLVSTYTLNS NYPSEIPVIQ SKLEDNPTLE TNKTKKKVQP HPKKQHPQQD
ISEENGLTAK QFLEEQSSPI PPSLNLLPSN LKHLPSIITD YMLVTNNFRI KGRELSASLD
NNTLSVCRYG DNTPMMQTCY SQGNWYEEIP TRLTRNEIEQ IESLRFFTQQ PLINQQRSQK
GIEQ