Gene Ava_C0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0127 
Symbol 
ID3678063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp156539 
End bp157531 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content51% 
IMG OID637715210 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_320404 
Protein GI75812787 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.130778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGT TTAAATATTC TAGCGCAACC GACGCAGCAA GCGCCGTTGG CACCGTTTCC 
GCTAATCAAA CGGCACAGTT TCTCGCAGGC GGGACAAATT TGATTGATTT GATGAAAGAA
TACGTCGAGC GTCCCAGCGA ACTTGTTGAC ATCTTAGGTT TGAATCTGGC GGAAATTCGA
TCGACCTCGA ACGGAATTTC TATCGGCGCG TTAGCCAAAA ATACTGATAC GGCTAACCAT
GCGCTCGTCC GGCAAAATTA CCCGCTTCTG TCAATGGCGA TTTTAGCTGG TGCCACCGTA
CAGCTTCGCA ATATGGCGAC CAACGGGGGA AATTTAATGC AGCGCACCCG TTGCCAGTAT
TTTTACGACA TCGCTATGCC GTGTAACAAA CGCGAGCCTG GCAGCGGATG CGGAGCGCTT
CAGGGACTCA ATCGCATTCA TGCCATTTTT GGCTACAGCG ATAAATGCGT GGCAACTTAC
CCAGGCGATA TGGCGAATGC GCTTTATGCG CTTGACGCGG TTGTGAAGGT TCGGGGCACG
AACGGGCGAG AACGCACAAT CCCGATCCAG GATTTTCATC GCTTGCCGGG CGACACGCCG
GAAAAAGATA ACAATCTTCA GCATGGGGAA TTGATCGTTG CCATCGAAAT GCCGAGGAAT
AACTTCGCCG ACAAGTCTTA TTACCTAAAA GTTCGCGATC GCACTTCATA TGCTTTCGCA
CTGCTTGCCG TTGCTGCTGC TTTAGAAACA AGAGGCAACA ACATCAAACA GGCACGCGTT
GTTTTGGGAA GCGTCGCGCA TAAACCTTGG CGTTCAGGCG AAGCGGAAAG AGTTTTGATC
GGAAAACCAG CGACGGAAGA AACTTTTCGG GCTGCTGCCG AAGTGGCTTT CAAAGATGCG
AAACCGCTTG AACATAACGG TTATAAAGTC GAACTCGGAA AACGCGCCAT TGTTCTCGCT
TTGCAGCGAG CGATGTCGGG CGGTGTTGCG TAA
 
Protein sequence
MKSFKYSSAT DAASAVGTVS ANQTAQFLAG GTNLIDLMKE YVERPSELVD ILGLNLAEIR 
STSNGISIGA LAKNTDTANH ALVRQNYPLL SMAILAGATV QLRNMATNGG NLMQRTRCQY
FYDIAMPCNK REPGSGCGAL QGLNRIHAIF GYSDKCVATY PGDMANALYA LDAVVKVRGT
NGRERTIPIQ DFHRLPGDTP EKDNNLQHGE LIVAIEMPRN NFADKSYYLK VRDRTSYAFA
LLAVAAALET RGNNIKQARV VLGSVAHKPW RSGEAERVLI GKPATEETFR AAAEVAFKDA
KPLEHNGYKV ELGKRAIVLA LQRAMSGGVA