Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0106 |
Symbol | |
ID | 3678081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 126992 |
End bp | 127657 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637715189 |
Product | isochorismatase hydrolase |
Protein accession | YP_320383 |
Protein GI | 75812766 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAA ATCCAAAAAT CGGCTTAGAA GGACTGCTTC GTCCAGAAGA TAGCATCCTG GTACTGATTG ACCACCAGCC TTATCAGTTC ACCAACTTGA ACAGCCATGA ACCCACGATG ATCATTAACA ATGTGATTGG TCTTGCTAAA TCGGCAAAAG TGTTTAACGT ACCCACAATC CTGACCACAG TCATTGAAGA GAGAGGGGGT TACATCATCA AGGGACTACA GGATGTTTTT CCCGATCAAA AACCGATCAA CCGCACTTTC ATCAATACTT GGGAAGATCC AAACGTTACA GATGTAGTGA AGAAAAGCGG CCGCAAGCAA CTTATACTTG CTGCGCTTTG GACCGAGATA TGTCTCGCAA TGCCAGCAAT CCAGGCGCTG GGTGAAGGTT ATGAAGTATT CATCGTTACC GATGCTTCGG GCGGTGTTAG TGCGGAAGCT CATGACATGG CGGTTCGCCG AATGGTTCAG GCTGGTGCAG TTCCAATCAA CTGGATGGCT GTACTTGCTG AATGGCAACG TGACTGGGCA CGCACAGAAA CATCTGCGGG TGTATCAGAG ATTCTTCTTG AGCATGGCGG TGCTAGTGCA GTGGCCCTTG CATGGGAACT TCAGATCCTG GCAACAACCC CTCCAGCGAC CTCAGGTGGA CATTAA
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Protein sequence | MSKNPKIGLE GLLRPEDSIL VLIDHQPYQF TNLNSHEPTM IINNVIGLAK SAKVFNVPTI LTTVIEERGG YIIKGLQDVF PDQKPINRTF INTWEDPNVT DVVKKSGRKQ LILAALWTEI CLAMPAIQAL GEGYEVFIVT DASGGVSAEA HDMAVRRMVQ AGAVPINWMA VLAEWQRDWA RTETSAGVSE ILLEHGGASA VALAWELQIL ATTPPATSGG H
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