Gene Ava_C0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0096 
Symbol 
ID3678051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp118701 
End bp119492 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content47% 
IMG OID637715180 
Producthypothetical protein 
Protein accessionYP_320374 
Protein GI75812757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.122908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTT TGAAACAATT TGGGATTCTA TTTGTGTTGG GCATTGCGGG AATTGTGATG 
CTTACGATTA CGTCGGTTCC ATTAATTGAG CAACGGTTAG CGAAGCTGTC TCCAGAAACA
CTGGAAAAAG TGCCGCCATT GGGGATTTTA ATGCTTCTGC AAGGACTACA GTATTCAATC
CTACTGGCAA TCAGCATTCT GATCGGAATT GGCTGTGCCT ATCGCGTTGG ATTACACTCA
CATTTGATTG ATCATTGGGT GTTGCACACC GCTAAGTCTC CATCTTTTGC CGTTGAGTTG
AAGTGGAGCT TGGGTGTGGG TGCAGCAGGG GCGATCGTTC TCTTGTTGCT CGATCGGTTG
ATGCAACCTG CCCTACCTGA AGCGCTACAG GCAGCCAATA ATACAGAGCG AAGTTGGTTG
AATTTGCTCA CAGCAATATT TTATGGCGGC ATCACTGAGG AAATTTTGAT GCGCTGGGGT
TTAATGTCGC TGCTTGTTTG GATCGCATGG AAAGTCTTCA AACAAGGCAT TACGTTGCCC
AGTCAAGGGA TTTACCAGGC TGCGATCGTT CTAGCCGCGT TGGTATTTGG ACTACTACAC
CTGCCAGCGA CTGCTGCGAT CGTTCCCCTC ACTCCAGTTG TAATTATTCG GGCGTTGTTA
CTGAATGGGA TTGTGGGAAT CGCGTTTGGC TGGCTCTTTT GGCAATATTC GCTAGAGGCT
GCAATGTTAG CTCATATCAG CGTTCATGCT TTTACCTTTG TTCTTAGCGG TTTGCTGGCT
CTTTTGGCTT AG
 
Protein sequence
MAVLKQFGIL FVLGIAGIVM LTITSVPLIE QRLAKLSPET LEKVPPLGIL MLLQGLQYSI 
LLAISILIGI GCAYRVGLHS HLIDHWVLHT AKSPSFAVEL KWSLGVGAAG AIVLLLLDRL
MQPALPEALQ AANNTERSWL NLLTAIFYGG ITEEILMRWG LMSLLVWIAW KVFKQGITLP
SQGIYQAAIV LAALVFGLLH LPATAAIVPL TPVVIIRALL LNGIVGIAFG WLFWQYSLEA
AMLAHISVHA FTFVLSGLLA LLA