Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0054 |
Symbol | |
ID | 3678091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 85263 |
End bp | 86204 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715138 |
Product | hypothetical protein |
Protein accession | YP_320332 |
Protein GI | 75812715 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0137082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0686234 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGATC AGCTGAATGC CTTAAGGGAT CTGGCAATTC CATTCCCAAT CACTGCTTCA TTTCGTCAAC AAGCTAGAGC CTATGCGTCA CAGTATTTCA CGCAAGATAC CCATGAAAGA GTTTATCTCA ACACCTTAGC TGTACTCGTT GCCAATGCGT ACTTCCGTCT GCTGAATTTT CAAACAAATC TTACCAAAGC AGAACGATGG AATGCAGCTT GCCGTGTGTG GAGCGAAGCA AACGAGATAG AATTGGTCGG ATTGGGCAAT TTAGAATGCC GCGTAATTAC AGCAGGGCAG CAGACTATTA TTCTACCACC GGAAACTTGG GCTGATCGCA TCGGCTATTT ATTTGTAGAA ATCACTAGTT CTGAAAAAGT AGCCACACTG ATTGGTTTTC TGCCCGCTTT TGATGCTGAA ACTTCTGGCG AAGAAGTGGC GATATCTACG ACGGGCTACG CCTACGCCGA TCTCAAGTCA ATGGACGAGG CGATGGACTA CTTGACACAA CAGGAAGCAT CTGCACGAAG TAAAACAGGT GAAATAGATA ACCTGACGCG GGACTTCGCT GCCAAAAAAA TTACTTATTT GAGAAACTGG CTGAATAATG TTTACGATTC CGACTGGGAA CCAGCAATGC GCGAGTTGAG TGCTGCTACC TGCAAGAAGA AGATCCAACT GGTAGGGCAG GTATTTGAAA TGCAACTTTC TGTTTCGCAA AGCAATGGAG CGATCACTGT TACAGTGATC GTTCGACTTG AAAGTGGTTT TCTACCTATA GGTATACAGG TTAGTGTACC CGACGAATCT GAGATTTATA CCGAAACAGT CAGTACTCCA GCCGACCTCA TCCGTATCCC CCTTGAATTC TCTCCTGGTG AAGAATTCTG GGTAGAATTG CGGTGGGGAG AAACTTTTAC TAGAGAATAC TTCATTGCTT AA
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Protein sequence | MDDQLNALRD LAIPFPITAS FRQQARAYAS QYFTQDTHER VYLNTLAVLV ANAYFRLLNF QTNLTKAERW NAACRVWSEA NEIELVGLGN LECRVITAGQ QTIILPPETW ADRIGYLFVE ITSSEKVATL IGFLPAFDAE TSGEEVAIST TGYAYADLKS MDEAMDYLTQ QEASARSKTG EIDNLTRDFA AKKITYLRNW LNNVYDSDWE PAMRELSAAT CKKKIQLVGQ VFEMQLSVSQ SNGAITVTVI VRLESGFLPI GIQVSVPDES EIYTETVSTP ADLIRIPLEF SPGEEFWVEL RWGETFTREY FIA
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