Gene Ava_C0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0054 
Symbol 
ID3678091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp85263 
End bp86204 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content45% 
IMG OID637715138 
Producthypothetical protein 
Protein accessionYP_320332 
Protein GI75812715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0137082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0686234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC AGCTGAATGC CTTAAGGGAT CTGGCAATTC CATTCCCAAT CACTGCTTCA 
TTTCGTCAAC AAGCTAGAGC CTATGCGTCA CAGTATTTCA CGCAAGATAC CCATGAAAGA
GTTTATCTCA ACACCTTAGC TGTACTCGTT GCCAATGCGT ACTTCCGTCT GCTGAATTTT
CAAACAAATC TTACCAAAGC AGAACGATGG AATGCAGCTT GCCGTGTGTG GAGCGAAGCA
AACGAGATAG AATTGGTCGG ATTGGGCAAT TTAGAATGCC GCGTAATTAC AGCAGGGCAG
CAGACTATTA TTCTACCACC GGAAACTTGG GCTGATCGCA TCGGCTATTT ATTTGTAGAA
ATCACTAGTT CTGAAAAAGT AGCCACACTG ATTGGTTTTC TGCCCGCTTT TGATGCTGAA
ACTTCTGGCG AAGAAGTGGC GATATCTACG ACGGGCTACG CCTACGCCGA TCTCAAGTCA
ATGGACGAGG CGATGGACTA CTTGACACAA CAGGAAGCAT CTGCACGAAG TAAAACAGGT
GAAATAGATA ACCTGACGCG GGACTTCGCT GCCAAAAAAA TTACTTATTT GAGAAACTGG
CTGAATAATG TTTACGATTC CGACTGGGAA CCAGCAATGC GCGAGTTGAG TGCTGCTACC
TGCAAGAAGA AGATCCAACT GGTAGGGCAG GTATTTGAAA TGCAACTTTC TGTTTCGCAA
AGCAATGGAG CGATCACTGT TACAGTGATC GTTCGACTTG AAAGTGGTTT TCTACCTATA
GGTATACAGG TTAGTGTACC CGACGAATCT GAGATTTATA CCGAAACAGT CAGTACTCCA
GCCGACCTCA TCCGTATCCC CCTTGAATTC TCTCCTGGTG AAGAATTCTG GGTAGAATTG
CGGTGGGGAG AAACTTTTAC TAGAGAATAC TTCATTGCTT AA
 
Protein sequence
MDDQLNALRD LAIPFPITAS FRQQARAYAS QYFTQDTHER VYLNTLAVLV ANAYFRLLNF 
QTNLTKAERW NAACRVWSEA NEIELVGLGN LECRVITAGQ QTIILPPETW ADRIGYLFVE
ITSSEKVATL IGFLPAFDAE TSGEEVAIST TGYAYADLKS MDEAMDYLTQ QEASARSKTG
EIDNLTRDFA AKKITYLRNW LNNVYDSDWE PAMRELSAAT CKKKIQLVGQ VFEMQLSVSQ
SNGAITVTVI VRLESGFLPI GIQVSVPDES EIYTETVSTP ADLIRIPLEF SPGEEFWVEL
RWGETFTREY FIA