Gene Ava_C0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0051 
Symbol 
ID3678088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp81444 
End bp82154 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content40% 
IMG OID637715135 
Producthypothetical protein 
Protein accessionYP_320329 
Protein GI75812712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.231649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0138382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTCAA CAAAGGGATT ACAAAGACTA GCTCAAATGC TGAGTCTTAG CGCATCTATT 
GTGTCACTTT CCTTACCTAT TTTAGCAGCT GAAGCAAATA ATCAGCCATT ATCATGGAAT
TTGTCACGGG ATCTAATGAT AGGATTTAAT GGAAATCCCA CCCGGACTTG GACATTCATG
AAGGCGCAAA CCATACATAA TCCGGGAAGT TATCAATCAC TTGAGAAGTT GGCTTCTCCT
TGTAGAAATT ATGTCGGTGT GCTTCTTACA AACATTCGAT GTTGGCAAAG AGTAGAAACC
CCTTCTGCTT TTATACCCTA TTTTGGAGTC TATCATTTAA ATCCCTCAAC TCCAATTCCA
GTTCCAGATT CCTCAATAGG TCTGGCAGGT CTAGCTGTTG CACACCCTAC TGTTAATAAT
GCGGTTGTTT TACGTTGGAC TAGCCCTATT CAAGGGCAAG TAAGCGTATT AGGAAGAATT
GCTCCTGTTG GAGCCTGTGG TAATGGCATT AAATGGTTTT TAGATCAAGA AAATCAACCT
CAAACTTTAC TCTCAGGTTC AACAAACAGT ATCGCTGGGC AGGCATCATC CTTTATCAAG
TCAGATATCC AAGTTTCAGT CGGCTCTTCG TTGTATTTTA TTATTGATAG CGATGGAAAC
GAAAATTGTG ATACAACCAC TCTAGACATA CTGATTGTTG CTCAAAATTG A
 
Protein sequence
MYSTKGLQRL AQMLSLSASI VSLSLPILAA EANNQPLSWN LSRDLMIGFN GNPTRTWTFM 
KAQTIHNPGS YQSLEKLASP CRNYVGVLLT NIRCWQRVET PSAFIPYFGV YHLNPSTPIP
VPDSSIGLAG LAVAHPTVNN AVVLRWTSPI QGQVSVLGRI APVGACGNGI KWFLDQENQP
QTLLSGSTNS IAGQASSFIK SDIQVSVGSS LYFIIDSDGN ENCDTTTLDI LIVAQN