| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0299 |
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| Symbol | |
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| ID | 3677585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | + |
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| Start bp | 319565 |
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| End bp | 320941 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 637715005 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_320199 |
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| Protein GI | 75812580 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA TGGATTGGGT AAGCTTGCTA AGTTTTCAAC AGGCTGATTT TATTCAAAAA
TTTAAGTCAG GCTATCTATT AAATGGCTCT TTTCAGAATC AATATAGTGA AATAATTGCT
ATTTCAGGCG ATAAGTTATG TGAGATGATA GAATGTTGCT GGGAAGCAAC CGAAAAAAAC
AAACAATCAT CTTATATACG TGAGTCATTT AGTAATAATT TAAAACTCAA ATTAATTGAA
GAATCCGTTA AATCTAAATT TGACGACTTT ATTTTAGATT TATCCAATAA TGAATCTATA
CAAGCCAATG ATTTCATTTT TAAACTTGAT TCTAATCCAT TAATTAAAAT ACTCATAAAA
TCATGTCAAT ACAAACCTGA CCATATAGAA TGGTCAATAC AAAAAAAAGA AATTGAAAAA
ATTTCCGCAA TATTATATGT TTTAATCCTA GAAGACCTAA CCATACCACA AAATGTATAT
AATATAGTAA TAGCTGGGTT TACAACAAAT AATATCGTCA TTAATAATAC TATTCTTTGT
ATTAAATTAG AAGATTTATT ATATTTTAGT GGCTTAAAAT ACTACTTAAG CACTTTAGAA
AAATCACAAA TTAATAATCT TATACAGGTA GGCAACATAC ATTTTAAAGA ACAGGATTAT
ACTAATGCCA TTACATACTA TAGTCAAGCA TTACAAATAA ATAATAAATC TGCTGATATA
CACTTTATGC GAGGGAAAAG CCGTTACTTA TTAGGTGATA TATCAGGTGC TATAAATGAT
TTTAGCCAGA CTTTAGAGAT TAATCCTAAC TTCATCGATG CTTATATACT GAGAGGTAGT
TGTAATTATA ATTTAGGCTG TGACTATGAA GTATTAGAAG ATTATACACA AGCTATAAAA
ATTGATCCTA ATAATTTTAA TGCTTATGTG TTACGAGGTG ATATACATTT TTATTTAGGA
GATGAAATTG ATTCCATCCA AGATTACAAT AAAGCCATAG AGATAAACGC TAATTGTGAT
TATATTTACT TTATGAGAGG TAGCGTTTAT CATGAAATAG GTCAATACAA TGAAGCACTC
ACTGATTACA ATGCAGCTTT AAAAATTAAC TCTATAAATC CTGAATGCTA TTTTAAAAAG
GGATGTATAT ATTATGAATT TGGAGATAAA GAAGTTGCAA TTAGTTATTT TAATCAAGCA
GCTAATTTAT GGAAAGAAAT AAATAAAATT GAAGACTCAA ATAAAGATAC AATAAATTTT
CGTAAGGATT CAGGTAACAG AGTATTGACA AAGGGGACAG TAGAGGTGGA GTATCAAAAA
TATGAACCAA AACTTGCCTC AAGATTTAGA CAGAGAAAGT TTGAGCCAGT TATCTAA
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| Protein sequence | MENMDWVSLL SFQQADFIQK FKSGYLLNGS FQNQYSEIIA ISGDKLCEMI ECCWEATEKN
KQSSYIRESF SNNLKLKLIE ESVKSKFDDF ILDLSNNESI QANDFIFKLD SNPLIKILIK
SCQYKPDHIE WSIQKKEIEK ISAILYVLIL EDLTIPQNVY NIVIAGFTTN NIVINNTILC
IKLEDLLYFS GLKYYLSTLE KSQINNLIQV GNIHFKEQDY TNAITYYSQA LQINNKSADI
HFMRGKSRYL LGDISGAIND FSQTLEINPN FIDAYILRGS CNYNLGCDYE VLEDYTQAIK
IDPNNFNAYV LRGDIHFYLG DEIDSIQDYN KAIEINANCD YIYFMRGSVY HEIGQYNEAL
TDYNAALKIN SINPECYFKK GCIYYEFGDK EVAISYFNQA ANLWKEINKI EDSNKDTINF
RKDSGNRVLT KGTVEVEYQK YEPKLASRFR QRKFEPVI
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