Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0239 |
Symbol | |
ID | 3677707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | + |
Start bp | 269867 |
End bp | 271558 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637714945 |
Product | hypothetical protein |
Protein accession | YP_320139 |
Protein GI | 75812520 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000660522 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAG CGTTGTGGTG TGGGCTTTTG GGTGTATCAA CATGGGTAAT TGCGGCGGAA GTGTGGGCGG CGGAAAATAC AGATGACTCA TTAGCACAGG TAACTTCCGT ATCTCAGTTA TCCGATGTCC AACCCACAGA TTGGGCGTTT GCAGCTTTGC AATCTTTAGT AGAACGTTAT GGCTGTATTG CAGGTTATCC CAACGGTACG TTCCGGGGAA ATCGTGCGAT GACTCGTTAT GAGTTCGCCG CCGGATTAAA TGCTTGCTTA GATAGGGTAA ATGAGCTAAT AGCTACGGCT ACGGCTGAAA CAGTTCAAAA AGAAGATTTA GCGACTTTAC AAAGGCTACA AGAGGAATTT ACAGCCGAAC TAGCAACTTT ACGGGGACGG GTGGATGCAA TAGAAGCCAG AACTGCAACT TTAGAAACAC AGCAGTTCTC TACAACTACC AAGCTTTCCG GCGAAGTGAT TTTTGCTATT ACTGATGTTT TGTCAGGAGA TAGTGATCCT TTTGGAGTGG ACTTACCTCG TAATAGTACG ATTTTAGCTA ATAGAGTTCG ACTCAATTTA CTTAGTAGCT TTACAGGGAA AGACGAGCTA AAAATTAGAC TACAAGCTGG TAGCACTCCC CACCCCCAAA GGGCTGGAGG TTTCCGCTAT GGAGCAGATC CCGTGCTGGC TTCCTTGGGA AGTCTACAAA CAACACCAGA AGGTAGTCAA ACCTTTAACC AAGAGTTTCC AGATCAAGCG GGTAGTGTAG AAATAGGCAC TGTTAGTTAT AAATTTCCGG TGGGTGATAA ATTACGCGCG GCTGTATTTG CCAATCGGGG AGAACACGTA GATTATTTAC CAAATGTGTT TAGTGCAGTT GGTGATGAAG ATGGGGGTTC TGGTTCACTT TCCACCTTTG CTCAATATAG CCCGATTTAT CGCATTGTTT CCCAAGGTGC GGGTGTGGGG TTGAATTATG AATTGAGTCC TGCTATTAAC TTGACTTTAG GATACTTAGC CCCAAATGCT AGTAGTCCAG AAAATTTAAC TCCTAGTAGC AGTAATGGCA CAACGGCTGG AGGTTTATTT AATGGTCGCT ATTCAGCTTT AGCACAATTA ACTATCCAAC CAACCAGAAA TTTAGCTTTC GGTTTAACTT ACGTTAATGC TTATACAGCA GGAACACCTA CTTTTCTCAA TGATGTGGGG ACAATTTCCG CAAATTCACC AAGTTTAATT TCTGATAATT CCCGACGCAC AATCAATGCT TATGGTGTAG CGGGGTTGTG GCGAGTTTCT CCCAAATTCG CTGTTAATGG TTGGTTTATG TATACCAATC AACAAGGCCA ATCCGCCGGG GAAGATAATG AAAGTGCAGA TGTTTACAGT TATGCGATCG CTCTAGCCTT TCCTGATTTG GGTAAAGATG GTAACTTGGG AGGTATTATC GTCGGTGTTC CCCCCTATGC TACTCGTTCT GGTGTCGTTC CCTTATATAG ACCCTTTTTA GGTGGTGCAA CTGACGTAAT CAGCACTATA CCTAATCGCG CTACCCCAGT ACATTTAGAA GCCTTCTACA AATATCAACT CAACGATAAT ATCTCAATTA CACCTGGAGT AATTTGGTTA ATTGCTCCTA ACCAAACCAG TGATAACCCT GATGTAGTTA TAGGTACAAT TCGCACTACT TTTAGGTTTT GA
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Protein sequence | MLKALWCGLL GVSTWVIAAE VWAAENTDDS LAQVTSVSQL SDVQPTDWAF AALQSLVERY GCIAGYPNGT FRGNRAMTRY EFAAGLNACL DRVNELIATA TAETVQKEDL ATLQRLQEEF TAELATLRGR VDAIEARTAT LETQQFSTTT KLSGEVIFAI TDVLSGDSDP FGVDLPRNST ILANRVRLNL LSSFTGKDEL KIRLQAGSTP HPQRAGGFRY GADPVLASLG SLQTTPEGSQ TFNQEFPDQA GSVEIGTVSY KFPVGDKLRA AVFANRGEHV DYLPNVFSAV GDEDGGSGSL STFAQYSPIY RIVSQGAGVG LNYELSPAIN LTLGYLAPNA SSPENLTPSS SNGTTAGGLF NGRYSALAQL TIQPTRNLAF GLTYVNAYTA GTPTFLNDVG TISANSPSLI SDNSRRTINA YGVAGLWRVS PKFAVNGWFM YTNQQGQSAG EDNESADVYS YAIALAFPDL GKDGNLGGII VGVPPYATRS GVVPLYRPFL GGATDVISTI PNRATPVHLE AFYKYQLNDN ISITPGVIWL IAPNQTSDNP DVVIGTIRTT FRF
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