Gene Ava_B0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0153 
Symbol 
ID3677940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp171968 
End bp172750 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID637714860 
ProductABC transporter-like 
Protein accessionYP_320054 
Protein GI75812435 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGG TAGTTGAGAA TTTGTCTTGT CGTATTGAGA AAACGCCGAT TTTGCGGGAT 
ATTAATCTGG AAGTCGCATC CGGTGAGTTT GTCGGGTTAA TTGGCCCTAA TGGAAGTGGG
AAATCTAGCC TATTGCGCTG TATTTACCGC GTTCTTAAGC CAGATACAGG ACGAATTACT
CTCAATGGAC AAGATATTTG GCGGTTGAGT CCCCGTGAGA TGGCGCAACA GACAGCAGTG
GTTTTACAGG AGACACCAAC GGAATTTGAT TTTACGGTCG AGGAAATGGT GTGGATGGGT
AGAAATCCCC ATCAAGGAAT GTTTGAGCGA GAAACAGCTA AAGACCGCGA TATCGTCAGG
GAAGCACTAT CTCAGGTGGG AATGCTGGAG TTTTGTGAGC GTTCCTTTGT TTCCCTTTCT
GGCGGTGAGA AGCAACGGGT ATTGGTAGCA CGAGCCTTAG CACAACAGGC GGGTTTTTTG
ATTCTCGATG AGCCGACTAA TCACCTTGAC ATTCGCTATC AGTTGGAACT TTTGGAGTTG
GTGAAGGGGT TGGGTGTGAC TACAATAGCA GCGTTACATG ATTTGAATTT GGCTGCTAGT
TATTGCGATC GCATTTACGT GGTGGACAAA GGAACAATCA AGTCTGCGGG AGTGCCGAAA
GAATTGCTCC AACCTGCTTT AATACAAGAG GTGTTCGGTG TGGGGTCAAA AGTGGAACAT
GATCCCAGCA TTGATAAGTT ACGTATTAGC TTCTTCCTAG ATAGGGGAAT TGAGAGCAGA
TGA
 
Protein sequence
MRLVVENLSC RIEKTPILRD INLEVASGEF VGLIGPNGSG KSSLLRCIYR VLKPDTGRIT 
LNGQDIWRLS PREMAQQTAV VLQETPTEFD FTVEEMVWMG RNPHQGMFER ETAKDRDIVR
EALSQVGMLE FCERSFVSLS GGEKQRVLVA RALAQQAGFL ILDEPTNHLD IRYQLELLEL
VKGLGVTTIA ALHDLNLAAS YCDRIYVVDK GTIKSAGVPK ELLQPALIQE VFGVGSKVEH
DPSIDKLRIS FFLDRGIESR