| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0111 |
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| Symbol | |
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| ID | 3677654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | + |
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| Start bp | 126026 |
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| End bp | 126970 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637714818 |
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| Product | sigma-70 |
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| Protein accession | YP_320012 |
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| Protein GI | 75812393 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCCCC AGCCAGATAG CGTAGGCATC TACTTACGAG AAATCTCTAA ATATCCCATG
CTGACTCCAG AGCAAGAAAT TACTTTGGCC AGACAGGTAA AGCAGATGAC AGTAGTTCAA
CAGCATAAAC AAGTTCTCGA AGAGCAACTA CATCAACAGC TAAATATACA GCAACTGGCT
GCTGACATGG GAAAAAGCGA AACCGAAGTA TTCCAGATTC TGCGGTTAGG GCAGAAAGCA
AAAGAAAAGA TGATTGCAGC TAATCTGCGG TTGGTGGTAG CGATCGCCAA AAAGTATCGG
TGGAGTCAAC TAGAATTTTT GGATTTAGTG CAAGAAGGTT CTATTGGGTT GCAAAAAGCA
GTCGAGAGAT TTGACCCGAA TCGCGGGTAC AAGTTTTCGA CCTGTGCTTA CTGGTGGATT
CGGCAAGAAA TCACAAAGGC GATCGCCAAT AAATCGACCA CAATCAGAAC ACCAAGTCAC
ATGAATGACC GCTTGATTAA ACTCAAAAAA GTACAACGAG AACTAGTAAA AATCCTGGGT
CGGGAGCCAA ATATTGCAGA AATAGCAGAA TTTGCTGAAC TTGAGCCAAA TCAAGTGAGA
GAATGTTTGA TAGCGTTTCG CCATCCTCTG TCTTTAGATC GGCCAATGGG TCAAGAGGAT
GAAGTTGACT TTTTGGAAAT TCTGCCTGCT GATGGCACTT CCCCAAATGA ATACCTAGAC
GAAGGATTTC TACGACAAGA TTTGGCGAAT TGTTTGATCA CACTCAAGCC ACTGCAAAAA
CAGGTGCTGA TGTTGCGCTT TGGTTTGGGT AGTGTTGACA AGCTCTCGAC CAAACAAATT
GCCGAAAGAC TCAACATAAA ACAAGCAAAA GTTGGGACAA CTCAAAAACA GGCGATAAAA
GTTTTGCATC GTCAGCAACC GCAGATGCGA GAGTATTTGG CTTGA
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| Protein sequence | MSPQPDSVGI YLREISKYPM LTPEQEITLA RQVKQMTVVQ QHKQVLEEQL HQQLNIQQLA
ADMGKSETEV FQILRLGQKA KEKMIAANLR LVVAIAKKYR WSQLEFLDLV QEGSIGLQKA
VERFDPNRGY KFSTCAYWWI RQEITKAIAN KSTTIRTPSH MNDRLIKLKK VQRELVKILG
REPNIAEIAE FAELEPNQVR ECLIAFRHPL SLDRPMGQED EVDFLEILPA DGTSPNEYLD
EGFLRQDLAN CLITLKPLQK QVLMLRFGLG SVDKLSTKQI AERLNIKQAK VGTTQKQAIK
VLHRQQPQMR EYLA
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