Gene Ava_B0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0095 
Symbol 
ID3677677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp105243 
End bp106271 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content43% 
IMG OID637714802 
ProductWD-40 repeat-containing protein 
Protein accessionYP_319996 
Protein GI75812377 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000200238 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTCA ACCGTATTTT GTGGAATTAC CTAATAGCCC CAACAGTAAT CACTATTGCT 
GTTTGCGGTT GCACTACACA GACTCCCAAC ACTCAGGATT TAATTGCTCA GTCGCCAAAA
GATAGCCAAT TAGTCCGTAC TTTATCAGCA CGGTCTGATT CAGGTTATTC GGTTGCGTAT
TCTCCAAGCT CTGTGGGAAC AATTCTTGCT AGTGCTGGTG CTAAAAGCAT TAAGCTTTGG
AATCCTAACA CGGGTAAACT ATTGCGTACT TTATCAGGAC AAGCTTTTAC TGTCGGCTTT
AGCCCAGATG GTCAGATTCT CGCTAGTGGT TCTCAGGACG GCAGCCTGAA TTTGTGGGAT
GTTCAAACAG GGAAACTCAT CCGTACACTC CAACACTCAG AACCAGTGCT TGGTGTAGTC
TTTAGTCCAG ATGGACAAAC TCTGGTTAGT AATCTTGATC TCGGATCTAT CATCAGGCTG
TGGAATTGGC GTACTGGAGA AATCATCCGC ATAAAGGATG ACCCTGACGC TTATCAAAAA
GGATTTGAGA ACTTCAAAAC TCAACCAGCC ACTTTTAGCC TGGATGGTCA GACCTTATTT
GCTACAAGTG GTTCTGGTTC TCTGCTCCAG TCTTGGAATC TGAAAACTAG TAAACGAACA
GGTAGTTTCG AGGCGAAATC ATCAATTAAT GCTGTCGCTA TCAGCCCAGA TGGAAACACC
CTAGCTACTG GCATTCGGGA TAATGCAATT AAGCTGTGGA ATATTAATGA TGGTAAACTC
ATTCACACTT TAACTGGTCA TAAAGGTCAA GTCAGAACTG TTGCCTTTAG CCCAGATAGA
ACATTACTGG CTAGTGGTAG CTCTGATGGC ACTGTCAAAT TGTGGAATGC TACTACTGGT
AAAGAAATCA ACACTTTTAC AGCACACAAA GAACAAGTTT GGTCTGTGGC TTTCAATCCT
GATGGCAAAA CACTTGCTAG TACTGGACAA GATGGCAGTG TTAAGATTTG GGGTGTATCC
CCACAATAA
 
Protein sequence
MTLNRILWNY LIAPTVITIA VCGCTTQTPN TQDLIAQSPK DSQLVRTLSA RSDSGYSVAY 
SPSSVGTILA SAGAKSIKLW NPNTGKLLRT LSGQAFTVGF SPDGQILASG SQDGSLNLWD
VQTGKLIRTL QHSEPVLGVV FSPDGQTLVS NLDLGSIIRL WNWRTGEIIR IKDDPDAYQK
GFENFKTQPA TFSLDGQTLF ATSGSGSLLQ SWNLKTSKRT GSFEAKSSIN AVAISPDGNT
LATGIRDNAI KLWNINDGKL IHTLTGHKGQ VRTVAFSPDR TLLASGSSDG TVKLWNATTG
KEINTFTAHK EQVWSVAFNP DGKTLASTGQ DGSVKIWGVS PQ