Gene Ava_B0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0028 
Symbol 
ID3677845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp42419 
End bp43180 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content38% 
IMG OID637714737 
Producthistidine kinase 
Protein accessionYP_319931 
Protein GI75812312 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.147051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAG AACATCTAAG CAAGCAACTG GATTTATTAG CTCTACTGCA CGATGTGTCA 
AACAATCATC AAGGAGCATC AATAGTGCTG AATCAGATGA TTGCTGGTGC TTATGGACAG
TCTTTAGAAG AAATTAGACC TTTTTTGATA AGTCTACAAG AACTCAATGA ACGAGTAGTG
AGTTTAATTC AATCTAGAAA GACTACTTTT TTTGAAGTTA ATCCAATGAC GGTAACTCAG
TTTGATATGT TAGCTTTTTT ACAGAAAACT TACTGTTTGT TCAATCCTAT AGCACAGTAT
CATTCGTTGA AACTGCACTA TGAAACTCAA ACATTATATA AGCATGGAAC TCAAGTCAGG
GCTGACGGAG TAAGTATTGA TAGGATGATT TGCAATATTC TCACCAACGC CATCAAGTAC
ACTAGTCGTG GAGAAATCTT TTTAAGACTT CTCCATCAAT GCGATGATTT AATTATCGAG
ATTGAAGATA CTGGGATAGG AATTGCTGCC GAACAAATCT CAAATATCTT CTTACCATTG
TGGCAATCGC CTAATTCATC CAATCGAGTA GGCATGGGAC TGGGATTGTA CATTGCTCTG
TCTGTGGCTT ACGCTCATGG GTTGGACATC AAGGTAAATT CGACTGTAGG GCAAGGAACT
AAATTCACCA TAATATTTCC TTACAAGGAT GACGGGATAT ATGGACTTGA TGGTAGGATG
TTGCCCAAAT CGCAGAAGGT GCAAGATGCG TTACCTATAT GA
 
Protein sequence
MQQEHLSKQL DLLALLHDVS NNHQGASIVL NQMIAGAYGQ SLEEIRPFLI SLQELNERVV 
SLIQSRKTTF FEVNPMTVTQ FDMLAFLQKT YCLFNPIAQY HSLKLHYETQ TLYKHGTQVR
ADGVSIDRMI CNILTNAIKY TSRGEIFLRL LHQCDDLIIE IEDTGIGIAA EQISNIFLPL
WQSPNSSNRV GMGLGLYIAL SVAYAHGLDI KVNSTVGQGT KFTIIFPYKD DGIYGLDGRM
LPKSQKVQDA LPI