Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0028 |
Symbol | |
ID | 3677845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 42419 |
End bp | 43180 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637714737 |
Product | histidine kinase |
Protein accession | YP_319931 |
Protein GI | 75812312 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.147051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAG AACATCTAAG CAAGCAACTG GATTTATTAG CTCTACTGCA CGATGTGTCA AACAATCATC AAGGAGCATC AATAGTGCTG AATCAGATGA TTGCTGGTGC TTATGGACAG TCTTTAGAAG AAATTAGACC TTTTTTGATA AGTCTACAAG AACTCAATGA ACGAGTAGTG AGTTTAATTC AATCTAGAAA GACTACTTTT TTTGAAGTTA ATCCAATGAC GGTAACTCAG TTTGATATGT TAGCTTTTTT ACAGAAAACT TACTGTTTGT TCAATCCTAT AGCACAGTAT CATTCGTTGA AACTGCACTA TGAAACTCAA ACATTATATA AGCATGGAAC TCAAGTCAGG GCTGACGGAG TAAGTATTGA TAGGATGATT TGCAATATTC TCACCAACGC CATCAAGTAC ACTAGTCGTG GAGAAATCTT TTTAAGACTT CTCCATCAAT GCGATGATTT AATTATCGAG ATTGAAGATA CTGGGATAGG AATTGCTGCC GAACAAATCT CAAATATCTT CTTACCATTG TGGCAATCGC CTAATTCATC CAATCGAGTA GGCATGGGAC TGGGATTGTA CATTGCTCTG TCTGTGGCTT ACGCTCATGG GTTGGACATC AAGGTAAATT CGACTGTAGG GCAAGGAACT AAATTCACCA TAATATTTCC TTACAAGGAT GACGGGATAT ATGGACTTGA TGGTAGGATG TTGCCCAAAT CGCAGAAGGT GCAAGATGCG TTACCTATAT GA
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Protein sequence | MQQEHLSKQL DLLALLHDVS NNHQGASIVL NQMIAGAYGQ SLEEIRPFLI SLQELNERVV SLIQSRKTTF FEVNPMTVTQ FDMLAFLQKT YCLFNPIAQY HSLKLHYETQ TLYKHGTQVR ADGVSIDRMI CNILTNAIKY TSRGEIFLRL LHQCDDLIIE IEDTGIGIAA EQISNIFLPL WQSPNSSNRV GMGLGLYIAL SVAYAHGLDI KVNSTVGQGT KFTIIFPYKD DGIYGLDGRM LPKSQKVQDA LPI
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