Gene Ava_B0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0008 
Symbol 
ID3677722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp11418 
End bp12395 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content38% 
IMG OID637714717 
Producthypothetical protein 
Protein accessionYP_319911 
Protein GI75812292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AGAATTTTAA TTTATTCTCA TTAATTACAT TGCTAACTTT ATTCTTCAGC 
AATCACGAAA GTTGGGGACA AACTATTTTA AAACAGGATA GTAATCATTG TACTAAACCA
ATCGGGCGAA TTGTTGAAGC AGGTAAAGGA AGATTAATTT GTCAAAATGA AAAAATCACT
TTAGAAAATG AATCTTTATT TATATGTTAC TCCGACCCAA AAATGCTGAA GCTGCAACCA
GGAGTTTACA TAATAGATTC AATATGCAAA GGAACTCAGG CAAGCCGGAA ATGTACTTTA
CTAACTACAG ATGTTTGTCC AAATCGTAAA GGGCCAAATC GAAGAGAAAA TGCACCTAAT
ATTATTCAGC CTTACGGTAA AATGTTAATC AACCGTCGTC CTTTGATATC CTGGACTGCT
GTACCAGGAG CAACCAGTTA CATTGTAGAA GTTTCTGGTG GAGGAGTGAA GTGGCAAAAG
CAAGTAGTTG GCACAACACT ATCTTACCCT CAAGACCAAC AAGAATTGTC CTATGGCAGT
GCAAATAAAA TTATAGTGAT TGCAAATAAA GGTGACACCC CCATAATTGA TGCTACTTTG
GTAGTGCATC TGTTGTCTGA GCAATCATCT CAACAAATTA ATCAAGCTGC TGAAACCATT
CAAAGTTTGG GATTATCTGC TGATGAAACA GCCTACATTG ACTTAGATGC AATCTATATG
TCCCAGAGAC TGCTCAACGA GACCATCAAG ACATTAGAGA CACGAGTTGT TGCAGGCAGT
TTTAATCCTA GCCTTTACCG CATCTTAGGC GATCGCTATG TAGAGGCATG GATGCCTCAA
GAAGCAAAAA CTGCATATAT AAAAGCACTC CAACTAGCTA GATTTCAAAA AAACCCTGGT
GAAGTGAAGT TGGTACAAGA GCGTTTATCA GCTTTAGTTC AAAGCCAACT ACCAACCAGA
ACAAATCCTG CCCAGTAG
 
Protein sequence
MKIKNFNLFS LITLLTLFFS NHESWGQTIL KQDSNHCTKP IGRIVEAGKG RLICQNEKIT 
LENESLFICY SDPKMLKLQP GVYIIDSICK GTQASRKCTL LTTDVCPNRK GPNRRENAPN
IIQPYGKMLI NRRPLISWTA VPGATSYIVE VSGGGVKWQK QVVGTTLSYP QDQQELSYGS
ANKIIVIANK GDTPIIDATL VVHLLSEQSS QQINQAAETI QSLGLSADET AYIDLDAIYM
SQRLLNETIK TLETRVVAGS FNPSLYRILG DRYVEAWMPQ EAKTAYIKAL QLARFQKNPG
EVKLVQERLS ALVQSQLPTR TNPAQ