Gene Ava_A0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_A0001 
Symbol 
ID3677972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007411 
Strand
Start bp10 
End bp957 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content28% 
IMG OID637715054 
Producthypothetical protein 
Protein accessionYP_320248 
Protein GI75812630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.368881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGA TATCTAAAGT GACACACAAC GAAAATAAAA ATCCATTTTT TCAATTAATT 
ACTGTTAAAG GTTGGAAAGT TATTAAGCAA CTTGGGCTAC TTATTATTAT TTGTGGCAGT
CTATACGTTT TGGATAATTA CTATTTAAAA CAGAATTGTG AGGGTCAAAA AACATCCTTG
AAATGTTCTC TTTCTCCGTT AGTTGGGGAT TTAGGAGGAA ACATTTTACA AATAGCTATA
CTTATTTGGT TTTTTGAAAT TGGATTAAGA CAAGAATCGA TAAAAGATAT GCAAGAGATT
TTTATCTCTA CACAACCAAC TAAGCATATT AAAGGATTTT ATTCAAAAAG AGCGGATTAT
AAACGTTTAA TTGAAGATAG TTTTGATACA GCTAATTCAT CTCAAGAAAT CAAAATATTA
TGTCTATCTG AGGAAGAAGT AAATTTTTTC ACACAGCAAA ATTTAATAAT AATAAGGAAT
AAAGTTATAG CTGGATGTCA GCTAAAATTT TTAATTTTAC ATCCACAATC ATGCTTGTTA
GATTGTCTAG ATCGTGTAAA ATTTGCTGAA AAAGCTACCC ATAAATCTCT TTTAGAAGGA
TTATCAGGAA AATTAAATCA ACTTGTAAAT ATGTTAGAGA TTTATCGAGC AACCAACCAA
CCAATTAAAG GTTCAATAGA AGTTAGATTT CATAAAGATT TATTTTCACC TATTGGCTAC
TATTCAGATT CAAGAAACTA TCGGATTGTC TGGATGTATT TCTCAGATCC TAATAATGGA
AATGAATATC CAGCATTTCA TATAAGTAAT AAAGACTTAA TTGATGATGC AGAAAGGCAT
TTTGATACTT TGTGGCAAGG AAGTGAAAAA GATATCTTAA AGGTTACACA AAACAACACA
AATAATAAGA TTAAACAAAT ATTTCAAGAA ATATCAGAAA ACAAGTAG
 
Protein sequence
MKRISKVTHN ENKNPFFQLI TVKGWKVIKQ LGLLIIICGS LYVLDNYYLK QNCEGQKTSL 
KCSLSPLVGD LGGNILQIAI LIWFFEIGLR QESIKDMQEI FISTQPTKHI KGFYSKRADY
KRLIEDSFDT ANSSQEIKIL CLSEEEVNFF TQQNLIIIRN KVIAGCQLKF LILHPQSCLL
DCLDRVKFAE KATHKSLLEG LSGKLNQLVN MLEIYRATNQ PIKGSIEVRF HKDLFSPIGY
YSDSRNYRIV WMYFSDPNNG NEYPAFHISN KDLIDDAERH FDTLWQGSEK DILKVTQNNT
NNKIKQIFQE ISENK