Gene Ava_5066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5066 
Symbol 
ID3683211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6362324 
End bp6363481 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content41% 
IMG OID637720427 
Producthypothetical protein 
Protein accessionYP_325558 
Protein GI75911262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0931999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.634764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA CTATTAGTAG TCGTGTAGAG TTAAGTCCGC ATCTAACCAT ATCTTCTGAC 
TTAACCTCTA ATCAGCGTCA AACCGATGAA GTAAAAGTGA ATACGAATAG CAGTAGATTG
GGAGAATATC CCCAGTTGCA ACTTTCTGCT ACTGGTATGC AGGTTGTACA CGCAACGAAT
GGACGCATAC GAATCAAGGC GACTGATGGT AGTTTTAGCG CCAACATCAA GACAATAACC
CAACACTTAA AACAGTATAA AAGTGTCAGA GAAGTTGCTA GTAATGAGCA AACTCTCAGT
ATGGTAATCA TCTTTGATGA AAATCAATTG TCACTACCGC AGATGTTGGG TATTTTGCAA
CAACTTAATA TTCAAACTTC ACAAAATTCA CCTTTATCAG ACCCCTTTGC TCCTTGGAAA
TCTGTAGATT TTTGGAAAGA GCAGACTGTC TCGTTTATTC CCTTAATGAC AGGTTTGGCG
GTGACAGGAG GGTTAGGAGT TAGTGGTTTA GCGGCGATTC CCCTCTATAT GATTACGGCA
GATGCAACTC GGCTAGTAAT TGACTATCTA GAACCGCAAA TTACGGGTTC AGATGCAGTC
AAAGAGTCGG CAAAAGCTGT GATAGTAACT GAAGAAAGTA AGCCAGAGAG CGCAGGAAAT
AGAATTACTA AGACAACAAT TAAGTCTGCG AAAGTAACTT ATAGTATTGT CCATGAAATT
CCTGGTAGGA TTAGGTTTCA TATACCTCAA ATAGCTAGCG ATCGCGCCTA TGCAAAGCGC
CTGGAAAGGC TATTAAAAGC TGATCCTTTG GTTAACAATG TGCGGATAAA TCGTGATGCA
GCATCTTTGG CGATCGCTTA TCAAAGTGGT AAGGTAGCTA CATCTCATTG GGTGAGTCTG
ATGGAATTAG CCATGCAGAC AACCCCCCCT ACACAACCCA TAACAAAAAT CAATCAGTCA
GCAGATATAG CCGTAGAAAA ATTGAGTACA ACTTCACCAA CGTTGGTAGC AGAAGCCGTT
AGTCAGCCAA CTCAGCCAAC AGAAACAGAA TTTTCCCCCA GCGCCAACCA AACCCTAAAT
ATTTCTGATT TCTGGGTTGA TATGAAGCCT GCCGCATTAT CCTATTCTTT AAACTTTATA
GCTAACTTGC CGTTGTAG
 
Protein sequence
MAKTISSRVE LSPHLTISSD LTSNQRQTDE VKVNTNSSRL GEYPQLQLSA TGMQVVHATN 
GRIRIKATDG SFSANIKTIT QHLKQYKSVR EVASNEQTLS MVIIFDENQL SLPQMLGILQ
QLNIQTSQNS PLSDPFAPWK SVDFWKEQTV SFIPLMTGLA VTGGLGVSGL AAIPLYMITA
DATRLVIDYL EPQITGSDAV KESAKAVIVT EESKPESAGN RITKTTIKSA KVTYSIVHEI
PGRIRFHIPQ IASDRAYAKR LERLLKADPL VNNVRINRDA ASLAIAYQSG KVATSHWVSL
MELAMQTTPP TQPITKINQS ADIAVEKLST TSPTLVAEAV SQPTQPTETE FSPSANQTLN
ISDFWVDMKP AALSYSLNFI ANLPL