| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5054 |
|---|
| Symbol | |
|---|
| ID | 3683536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 6346168 |
|---|
| End bp | 6348018 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637720415 |
|---|
| Product | Serine/threonine protein kinase |
|---|
| Protein accession | YP_325546 |
|---|
| Protein GI | 75911250 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[S] Function unknown
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.688753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCT GCCAAAATCC CAATTGTTCA AACCCATTCA ATCCTGATGG CAATAGATTT
TGCATGAGTT GCGGACAAAG CAACTTTGGC AAACTACTAA GAAATCGCTA CCGCGTACTA
GGACTATTAG GTGAAGGTGG ATTCAGCAAA ACCTACGCAG CTGAAGACGC AGATAGACTA
GATGCGCCTT GTGTCATCAA ACAATTCTTT CCACAAATTC AAGGAACTGG ACAGCGCAGC
AAAGCGGCAG AATTCTTTAA AGAAGAAGCC TTCCGTCTGT ATGAACTGGG AGAAAATCAC
ACTCAAATTC CGAGATTATT AGCTTACTTT GAACAAGGTT CTAGCTTATA TCTTGTTCAA
GAGTTTATTA AAGGACTAAC ACTTTTACAA GAAGTTCAGC AAGAACCCTT TAATGAAGAA
AAAATTCGGC AACTGTTAAT TGATTTATTA CCAGTTCTCG ATTTTATTCA TTTTCATCAA
GTTATCCACC GAGATATTAA ACCAGAAAAT ATTATTCGCC GTGATGGTGA TGGCAAATTA
GTATTAATTG ATTTTGGTGG TGCTAAACAA GTTACCCAAA CTAGTATAGC TAGACAAGCA
ACAGCTATTT ATACCATTGG TTATGCACCA ACGGAACAAA TGGCAGGGTT TGCTTGTCAT
GCTAGTGATT TATATGCTTT GGGTGTTACT TGTGTTAGAT TATTAACCCA ATGCCTACCG
CAACAAAATC CTTACGGACA TATCGATGAT GGTCTTTATG ACCCCATGAA TGGTAAATGG
TTATGGCAAG AATATCTACA GGACAGAGGT ATCAAGATTA GTGAGAATTT AAGTCAAATT
TTAGATAAAT TACTCAAGCA TTTACCTAGC GAAAGATATC AATCAGCTGC CGAAGTCCTC
CATGATTTAC AAGTATCCAC AGCCATAGTT GAAGAAACTC AAATTCTGCC AAATACTCAA
ACAACATTAG TCCCATTAGC ACCAGCAACA CAAAGAACAA AACGGCCATT ACCTCCCCTA
CAAACCTTTG AGTATGAGGT AGTTACAGTA GATACAGCTG GCCGCATCGT CAACCGCGAT
CGCACCAATA CCCAAATTTT GGTAGAACAA TTAAACAAAG ACATTACCCT AGAAATGGTG
TCAATTCCTG GCGGTGCATA CCTGATGGGT TCGCCCAACT TTGAAGGCGA TGCCGACGAA
CGCCCCCAAC ACCAAGTAGC GATCGCCCCC TTTTTCATGG GAAAATATCC CGTAACTCAA
GCACAGTGGC GAGCTGTGGC TGGCTTACCC AAAATTAAAC AAGCCTTAAA TCCCTACCCC
TCAAAATACA AAGGTCAAAA TCGACCAGTA GAAAACGTCT CTTGGCACGA AGTTTTAGAA
TTTTGTGCTA GACTCTCCGA AAAAACCGGA CGGGAATATC GCCTACCCAG CGAAGCCGAA
TGGGAATATG CTTGTCGTGC TGGAACAACT ACATCTTTTC ACTTTGGCGA AACCATCACC
CCCGATTTAG CCAACTTTAG CGACGGCGAT ATTCACAATC TTGAAGCCAA AACCAGATAC
CGCAAAGAAA CTACAGATGT CGGCAACTTT CGCGTAGCCA ATGCCTTTGG ATTGTACGAT
ATGCACGGAC TAGTCTGGGA ATGGTGTGCC GACCCTTGGC ACAATAACTA CAACGGCGCA
CCAACTGACG GTAGTGTGTG GGAAGCAGGT GGTGATATAT ATCGCCGAGT GTTGCGTGGC
GGTTCTTGGA ACTTTGCCGC AGAACTGTGT CGCAGCGCCA GCCGCAGTTG GAATGAGTCA
GACGGTGGCT TAAGGATATG CGGTTTTCGA GTTGTATTTT CCCCAGGTTA G
|
|---|
| Protein sequence | MQICQNPNCS NPFNPDGNRF CMSCGQSNFG KLLRNRYRVL GLLGEGGFSK TYAAEDADRL
DAPCVIKQFF PQIQGTGQRS KAAEFFKEEA FRLYELGENH TQIPRLLAYF EQGSSLYLVQ
EFIKGLTLLQ EVQQEPFNEE KIRQLLIDLL PVLDFIHFHQ VIHRDIKPEN IIRRDGDGKL
VLIDFGGAKQ VTQTSIARQA TAIYTIGYAP TEQMAGFACH ASDLYALGVT CVRLLTQCLP
QQNPYGHIDD GLYDPMNGKW LWQEYLQDRG IKISENLSQI LDKLLKHLPS ERYQSAAEVL
HDLQVSTAIV EETQILPNTQ TTLVPLAPAT QRTKRPLPPL QTFEYEVVTV DTAGRIVNRD
RTNTQILVEQ LNKDITLEMV SIPGGAYLMG SPNFEGDADE RPQHQVAIAP FFMGKYPVTQ
AQWRAVAGLP KIKQALNPYP SKYKGQNRPV ENVSWHEVLE FCARLSEKTG REYRLPSEAE
WEYACRAGTT TSFHFGETIT PDLANFSDGD IHNLEAKTRY RKETTDVGNF RVANAFGLYD
MHGLVWEWCA DPWHNNYNGA PTDGSVWEAG GDIYRRVLRG GSWNFAAELC RSASRSWNES
DGGLRICGFR VVFSPG
|
|---|
| |