| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5027 |
|---|
| Symbol | |
|---|
| ID | 3678883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 6314950 |
|---|
| End bp | 6315717 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637720387 |
|---|
| Product | phosphoesterase, PA-phosphatase related |
|---|
| Protein accession | YP_325519 |
|---|
| Protein GI | 75911223 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.223489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.43198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTT TAGAAAAAGT CCGAGATGAA AAGTTGCGAT CGCCTATTGG ATTTGTGCAA
AGATTGTTAA CCATACACTG GCGCTCTTTG TTGGTACTGT TTTTGGGAGT ATATATACCA
TTACAAATTT TTGGACTGCT AGCGTTAGAG GTGCGGTATA ACGAGGGTGG TTTTCCTTGG
GATTTACCGA TTTTGGTGAC GCTTCACGCT GTAAAACTGC CAAATTTGGA TATATTTGCC
GCCATACTCA CAAAATTCGG TTCTTTTTGG ACTATAGCCC CTACTTTAAC TGTTATTGGC
CTGATATTAC TATTGCAACG GCGCTGGCGC TCTCTCTCGT ATTTACTGAT TACTGCTGCG
GGTAGTGCTA CTATCAACCG CACAGCTAAA ATATTTTGGC ACAGAGTCCG GCCTCATCTA
TGGGAATCAG TCGCACCAGA GTTTGATTAT TCATTTCCCA GTGGTCATGC TATGACGAGT
ATGACGTTGA TTGCCATATT GGTAGTTTTA ACTTGGGGTA GCACTTGGCG TTGGTTAACA
GTGATTTTAG GTAGTGTGTA TATCTTAGCC ATTGGTTGGA CAAGGCTATA TTTAGGAGTA
CATTTTCCCA GTGACATTAT CGCAGGTTGG ATGGTGGCGA TCGCTTGGGC AATTGGCGTA
AGTTTTATCA TTCGACCATT ATCACAGGCA GCCAATATTA CAACTGAAAA ACCCATGATT
GAAGCAAAGT TACTTCCTGA AGAACGGGAA TTGCTCCATA ATGAGTAA
|
|---|
| Protein sequence | MPFLEKVRDE KLRSPIGFVQ RLLTIHWRSL LVLFLGVYIP LQIFGLLALE VRYNEGGFPW
DLPILVTLHA VKLPNLDIFA AILTKFGSFW TIAPTLTVIG LILLLQRRWR SLSYLLITAA
GSATINRTAK IFWHRVRPHL WESVAPEFDY SFPSGHAMTS MTLIAILVVL TWGSTWRWLT
VILGSVYILA IGWTRLYLGV HFPSDIIAGW MVAIAWAIGV SFIIRPLSQA ANITTEKPMI
EAKLLPEERE LLHNE
|
|---|
| |