Gene Ava_4994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4994 
Symbol 
ID3679044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6275165 
End bp6276484 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content42% 
IMG OID637720352 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_325486 
Protein GI75911190 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.517001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.941051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGATT TACATGAAAA AAAGGCACCA CATCAGGTTG TAATTGTTGG TGGTGGCTTT 
GGTGGACTTT ATACAGCAAA GACTCTTGCG AAAGCAAATG TAAGTGTTAC TCTTATCGAT
AAACGTAACT TTCACTTATT TCAGCCACTT TTATATCAAG TTGCTACAGG TACCCTATCA
CCTGGCGACA TTTCCTCACC ATTACGAGCT GTATTCAGTA AAAGTAAGAA TACACAAGTG
TTGCTGGGAG AAGTAAAGGA TATTAATCCC AAAGCACAAC ACGTTATCTT GGATGATAAA
GTAGTACCAT ATGATACATT GATCGTCGCC ACAGGTGCTA ACCATTCTTA TTTTGGGAAA
GACCACTGGA AAGACCTTGC ACCCGGTTTG AAAACCGTGG AAGACGCGAT AGAAATGCGT
CGCCGGATAT TTGGCGCATT TGAAGCAGCA GAAAAAGAAA CAGACCCCGA AAAGCGCCGT
GCTTGGCTGA CTTTCGTGAT TGTAGGGGGC GGCCCGACTG GTGTAGAATT AGCGGGTGCG
ATCGCCGAAT TAGCATACAA AACCCTCAAA GAAGATTTTC GCAGCATCGA CACCTCAGAA
ACAAAAATTT TACTACTGCA AGGGGGCGAT CGCATCCTTC CCCACATTGC GCCAGAGTTA
TCCCAAGTAG CAGCAGAATC TTTGCAAAAG TTGGGTGCAA TTATCCAAAC TAAAACGCGG
GTGACCAATA TTGAAAATGA CATCGTTACT TTCAAAAATG GCGATGAAGT TAAAGAAATT
CCCTCAAAAA CTATATTATG GGCAGCAGGT GTAAAAGCTT CCCCAATGGG AGAAGTCCTA
GCAGAACGCA CAGGTGTAGA ATGTGACCAC GCCGGACGTG TAATTGTAGA ACCAGACTTA
ACTGTTAGAG GTTACAAAAA CATTTTTGTT GTGGGAGATT TAGGCAACTT CTCCCATCAA
AATGGTAAAC CCTTACCCGG TGTTGCACCC GTAGCTACAC AACAAGGAGA GTATGTAGCC
AAACTCATTA AAAAACGCCT AAAAGGTCAA ACTTTGCCAG AATTTCGTTA TAATGATGTG
GGCAGTTTGG CAATGATTGG GCAAAACCTA GCTGTCGTAG ATTTGGGCTT AATTAAGCTG
CAAGGTTTTA TTGCTTGGGT ATTCTGGCTA TTAATTCACA TCTACTTCTT AATCGAGTTT
GACACTAAAC TACTAGTAGT ATTTCAGTGG GCGTGGAATT ATATCACTCG TAATCGTCGC
TCCAGATTGA TTACAGGTCG AGAAGCTTTT GTAGAACCAA AAACGGTGAA TCAACAATAG
 
Protein sequence
MVDLHEKKAP HQVVIVGGGF GGLYTAKTLA KANVSVTLID KRNFHLFQPL LYQVATGTLS 
PGDISSPLRA VFSKSKNTQV LLGEVKDINP KAQHVILDDK VVPYDTLIVA TGANHSYFGK
DHWKDLAPGL KTVEDAIEMR RRIFGAFEAA EKETDPEKRR AWLTFVIVGG GPTGVELAGA
IAELAYKTLK EDFRSIDTSE TKILLLQGGD RILPHIAPEL SQVAAESLQK LGAIIQTKTR
VTNIENDIVT FKNGDEVKEI PSKTILWAAG VKASPMGEVL AERTGVECDH AGRVIVEPDL
TVRGYKNIFV VGDLGNFSHQ NGKPLPGVAP VATQQGEYVA KLIKKRLKGQ TLPEFRYNDV
GSLAMIGQNL AVVDLGLIKL QGFIAWVFWL LIHIYFLIEF DTKLLVVFQW AWNYITRNRR
SRLITGREAF VEPKTVNQQ