Gene Ava_4965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4965 
Symbol 
ID3679074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6245229 
End bp6246413 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content44% 
IMG OID637720323 
Productankyrin 
Protein accessionYP_325457 
Protein GI75911161 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID[TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAA ATTTACAGCC ACTTACGCAT AATTTAGTAC TAATTGGTGG AGGTCATACT 
CATGCTATTG TACTCAGAAT GTTTGGCATG AAACCTCTAT CTGGAGTACG TTTAACTTTA
ATTACTCCGT CCGTTGAAAC ACCATACTCT GGAATGTTAC CAGGACATAT TAGCGGTGTT
TACAACCATG ATGAATGCCA TATTAACTTG CAAAGATTAG CTAACTTTGC TCAAGCGCAA
TTGTATATTG ATACAGCAGT TGACCTGGAT TTGAAAAACT ACAAGGTGAT TTGTGCTAGT
CATCAGGCAG TAGATTTCGA CTTGCTGTCT ATCGATATTG GAAGCACTCC AGCCACAATG
TCTGTATCCG GTGCAGCAGA ATATGCAGTT CCGGCTAAAC CAGTGTCGCA ATTACTAGAA
CATTGGTATC AGATGCTAGA TAGTGTAGTT CAAAAACCGC AAATCAACAG GAGTATTGCG
ATCGCCGGCG GTGGTGCAGG TGGTGTAGAA TTGGCACTAT CAATGCAGGC GCATCTACAC
CGCATCTTCA AACAAGCCCA ACAACCCCTA AGTAATCTGG AAATTCATTT ATTTCATCGC
CAAGCCGAAC TGATGTCCCA TCATCACCCA TCAGTGCAAC GTCAAGTCAA ACAAGTTCTC
ATGGCACGGG GTGTTAAGCT TCACTTGAAG GAAACAGTTT CTCACATTGC ACCCTCTACC
GACACCCAAG ACGAAGAACT ATTAGAAGTT CAATGTGAAT CTGGCATCAA AGTAAATTGC
CATAAAATTT TTTGGGTAAC CCAAGCCTCA GCCCCCCAAT GGTTAAAAGC CACAGGATTA
GCCACCGATG AGAGGGGCTT TATTTTAGTT GAGGACACAT TACAATCGCC CACACACCCA
GAGGTATTTG CAGCTGGTGA CATCGCCACA ATGATTCATC ATCCCCGCCC AAAAGCAGGG
GTATTTGCTG TACGCCAAGG TAAACCCTTA TTCGACAACC TCAGGCGGAA ATTAAGGGGA
CAACCGCTCA AACCCTACAA ACCACAGCAA CAATATTTAA GTTTAATTGG TACAGGTGAC
AAACGAGCGA TCGCTACCAA AGGTTGTATC ACTTTACCAC CCCATCAATT ATGCTGGCAA
TGGAAGGACT GGCTTGACCG TCGCTTTATG CAGCAATTCC CATGA
 
Protein sequence
MLQNLQPLTH NLVLIGGGHT HAIVLRMFGM KPLSGVRLTL ITPSVETPYS GMLPGHISGV 
YNHDECHINL QRLANFAQAQ LYIDTAVDLD LKNYKVICAS HQAVDFDLLS IDIGSTPATM
SVSGAAEYAV PAKPVSQLLE HWYQMLDSVV QKPQINRSIA IAGGGAGGVE LALSMQAHLH
RIFKQAQQPL SNLEIHLFHR QAELMSHHHP SVQRQVKQVL MARGVKLHLK ETVSHIAPST
DTQDEELLEV QCESGIKVNC HKIFWVTQAS APQWLKATGL ATDERGFILV EDTLQSPTHP
EVFAAGDIAT MIHHPRPKAG VFAVRQGKPL FDNLRRKLRG QPLKPYKPQQ QYLSLIGTGD
KRAIATKGCI TLPPHQLCWQ WKDWLDRRFM QQFP