| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4926 |
|---|
| Symbol | |
|---|
| ID | 3679152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 6194807 |
|---|
| End bp | 6195892 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637720284 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_325418 |
|---|
| Protein GI | 75911122 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.26381 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCA AGCGTCGGCA ATTTCTGAAA ACTTGCGGAT TAGCTACTGT AGCTACTCAG
ATTCCTCTAC TTACTGCTCA AGGTGAGCAA TGGTCTTCTC TACAAGACAC TACACCTAGC
TTGCGTCTCC GGAGGAGTAC GAGCAACGCT CGGTCATTGT CAAACACTAT CATCAAGCCA
CAACGCTTAC AAGTAGGCGA TACGGTGGGG TTAATTGCGC CGGCTGGTAC TTTTGAACCT
CGATATATAG AAGTAGTCCA GCAACATCTG ACTAATTTGG GATTAAAAGC TAAGGTGGGA
AGACATATTT TAGACCGTTA TGGTTATTTA GCAGGTAGAG ATGCTGACCG CGCCCAAGAT
GTAAATGATA TGTTTGTAGA TGATTCGGTT CAAGCAATTC TGGCTATGCG TGGGGGTTGG
GGTTGCAATC GGATTTTACC CTTACTCAAT TACCCCTTAA TTCGTTCCCA TGCCAAAATT
CTCATGGGTT ATAGCGATAT TACTTCTTTG TTATTAGCGA TTAATGCCCG TAGTCGCATT
CTCACTTTTC ACGGGCCTGT GGCTACATCC ACCTGGACAC CCTTTATGCT GGAGTACCTG
AAGCGTATTT TATTTAATGC AGAAGCAGTA ACATTAGAAA ATACCGATTC TCCTGAGGGA
AAAGTACAAA CAATCACACC AGGAAAAGCG CAAGGTCAAC TTGTAGGCGG TAATTTGTCA
GTTTTATCTG CAATGGTTGG TTCACCCTAT TTACCTGGTT GGCAAAATAG AATTTTATTT
TTGGAAGATG TGAACGAGGA TGTTTATCGC GTAGATAGGA TGTTGACGCA GTTAAAAAAT
GCTGGAATAC TATATCGAAT TTCCGGTTTT ATCTTTGGTC AATGTACTGA CTGTAAGCCA
ACTAATGAAA AATCTCAGAC GTTAATAGAA GTATTACAAG ACCATATCAC TCCTTTAAAA
ATACCCTCTT GGTATGGTGC AATGATTGGT CATATTCAAG ATAAATTTAT CTTACCAATT
GGCGCAAATG TGGAAATCGA CGCTGATGCT GGAACAATAG AATTATTAGA GGCGGCGGTC
AATTGA
|
|---|
| Protein sequence | MNIKRRQFLK TCGLATVATQ IPLLTAQGEQ WSSLQDTTPS LRLRRSTSNA RSLSNTIIKP
QRLQVGDTVG LIAPAGTFEP RYIEVVQQHL TNLGLKAKVG RHILDRYGYL AGRDADRAQD
VNDMFVDDSV QAILAMRGGW GCNRILPLLN YPLIRSHAKI LMGYSDITSL LLAINARSRI
LTFHGPVATS TWTPFMLEYL KRILFNAEAV TLENTDSPEG KVQTITPGKA QGQLVGGNLS
VLSAMVGSPY LPGWQNRILF LEDVNEDVYR VDRMLTQLKN AGILYRISGF IFGQCTDCKP
TNEKSQTLIE VLQDHITPLK IPSWYGAMIG HIQDKFILPI GANVEIDADA GTIELLEAAV
N
|
|---|
| |