| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4824 |
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| Symbol | |
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| ID | 3679400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 6060462 |
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| End bp | 6062138 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637720181 |
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| Product | Beta-Ig-H3/fasciclin |
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| Protein accession | YP_325316 |
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| Protein GI | 75911020 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.597464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.196528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGTT CGGTTCGACG GTCACTAGCC TACACAACTT TGCTGGCTTT GGGGATGACA
GCTATAACAA TAAATCCCTT AATAGTTTCT AAACCAGCTT CAGCACAAAC ACCTGTCCCT
ACAGAAACTC CGTCTACTAC AGGTTCCAAC TTTTCTGATG TCAGTTCAGA TTACTGGGCG
CAACCATTTA TTCAAGCTTT AGCGCAAAGA AATATCATTG CTGGTTTTCC CGATGGTACT
TTTAGACCAA ACCAGGCAGT AAGTCGCGCT GAGTTTGCCA CATTAATTCA GAAAGCTTTT
AATCAACAAC CGGTCCGACA ATTAAGTGCA TCTGGATTTA CAGATGTACC TGCAAATTTC
TGGGCATCGC AAGCAATTCG GGAAGCTTAC GAAACGGGAT TTCTCTCCGG CTATCCAGGG
AATGTGTTTC GCCCCAATCA ACAGATTCCT AGAGTACAGG CGATCGTTGC TTTAAGCAGT
GGTTTAAACT TAACTACAAC TGATACTGCG TCAAATATTC TCAGCAATAA CTATGCAGAT
GCTTCGGCAA TTCCTGACTA TGCTGTCAAC GGCGTAGCCG CAGCAACACA AAGCAACATA
GTTGTTAACT ACCCAAATGT AAGAGAACTG AATCCCTCAA CATCTCTTAC CCGTGGGGAA
GCTGCCGCAA TTTTGTATCA AGCTTTAGTT CGACAAGGAC AAGTACAACC TCTACCTAGC
AATGTTGCAG CTGCTAACTA CGTAGTGGGT GGGACTGGTA CAACAGGAGG TACACAAGGT
GCTAATAATA TTGTTGCTTT GGCAGCATCA AGTAACTCTT TTAGTACCTT GACTTCTTTA
TTGAGAACCG CAGGTTTAAC AGATATTCTA GAGCAACCAG GGCCTTACAC AGTCTTTGCT
CCCACCAATG AAGCATTTGC AGCGTTACCT GCGGGTACTT TAGAACAACT GCAACAACCA
CAGAACAGAG AGTTGTTGGT GAGAATTTTG CGCTATCATG TGGTTCCTGG TCAATTAACT
GCTAACCAAC TCTCTTCTGG ACAACTGACA ACTGCTAGCG ATGCACCAGT CAATGTGAGA
GTTGACACAG CCAATAATCA AATTGCCGTT AATGAGGCGA GAGTTGTTCA AGCAAATATT
CAAGCTAGCA ATGGTGTTAT CCATGCTATT AACGAAGTCC TGATTCCACC TAATTTAACT
GGTCAGCAGC CGCAAGAAGG AACCCCTCAA GCACAAAATC CGGGTGCTGT CACTCCAGGT
AGAGCTACCC GTGGCGGTTC TAGTTACATA GGGGTTGCTG GTAACATTGG TTTAGGTGGT
GATACAGCTC TCAGCGATAG CAACTTTGCA GTTATCAGTA AAGTTGGTTT GACACGCAAT
CTATCAGTCC GACCATCAGC TGTTTTTGGT AACGATACGG TATTTCTAGT GCCGTTGACC
TTGGATTTCA CACCCCGCGC AGTAGAGCCT GGTGTTGTGC AGCCATTCGC CGTATCACCT
TATGTTGGTG CTGGTGTAGC AATCGAAGCT AGTGGCGACA CTGATATTGG TTTACTGTTA
ACTGGTGGTG TTGATATTCC TTTAGGACAG AGATTTACCA TTAATGGTGC TGTTAATGCA
GCTTTTGTAG ATGAAACTGA TGTTGGTTTG CTATTAGGTA TTGGCTACAA TTTTTAG
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| Protein sequence | MFSSVRRSLA YTTLLALGMT AITINPLIVS KPASAQTPVP TETPSTTGSN FSDVSSDYWA
QPFIQALAQR NIIAGFPDGT FRPNQAVSRA EFATLIQKAF NQQPVRQLSA SGFTDVPANF
WASQAIREAY ETGFLSGYPG NVFRPNQQIP RVQAIVALSS GLNLTTTDTA SNILSNNYAD
ASAIPDYAVN GVAAATQSNI VVNYPNVREL NPSTSLTRGE AAAILYQALV RQGQVQPLPS
NVAAANYVVG GTGTTGGTQG ANNIVALAAS SNSFSTLTSL LRTAGLTDIL EQPGPYTVFA
PTNEAFAALP AGTLEQLQQP QNRELLVRIL RYHVVPGQLT ANQLSSGQLT TASDAPVNVR
VDTANNQIAV NEARVVQANI QASNGVIHAI NEVLIPPNLT GQQPQEGTPQ AQNPGAVTPG
RATRGGSSYI GVAGNIGLGG DTALSDSNFA VISKVGLTRN LSVRPSAVFG NDTVFLVPLT
LDFTPRAVEP GVVQPFAVSP YVGAGVAIEA SGDTDIGLLL TGGVDIPLGQ RFTINGAVNA
AFVDETDVGL LLGIGYNF
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