| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4813 |
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| Symbol | |
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| ID | 3679428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6047243 |
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| End bp | 6051676 |
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| Gene Length | 4434 bp |
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| Protein Length | 1477 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637720170 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_325305 |
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| Protein GI | 75911009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.974814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCT CACCCGAACC TCAACCCGCA AATCATAGCA CTCTATTTAG CTACCAAGTG
GGCGGCAGTT TGCCCATCGA TAACCCTGCC TATGTAGAGC GACAGGCAGA TCGGGAACTG
TATGAACGTT TAAAGGCGGG TGAGTATTGT TTCGTGTTTA ACTCGCGGCA AATGGGTAAA
TCGAGTTTGC GAGTACGGGC AATGCAGAAA TTACAGCAGG ATGGGGTCGT CTGTGCTGTC
ATCGATCCGC AAACGCGGGG TACGACTTTG CGCGAAGATC AATGGTATGC AGGGACAATC
AAGCGGCTAA TTGGCGACCT CCACCTACAA GATAAAATAG ATTTCCCTGG GTGGTGGAAA
CAACTAGATG GGCAATCTAT TTCTGTAGTT GAGCGTTTTT ATGAGTTTAT CGACCAGATT
TTGCTACCCC AGACTACCCA AAATATCACT ATTTTTGTGG AAGAGGTTGA TAACCTCCTC
AGTCTCAAAT TTGATACCGA TGGATTTTTC ATTCTGATTC GTTCTTTATA TGAAAGGCGG
GCAGAAAAGC CAGATTATAC CCGCCTGACC TTTGCATTCT TGGGAGTAGC AACACCTTCT
GACCTCATTC GCAGTAGGCG GAGTTCTTCC TTTAATATCG GCCATGCAGT AGAGATGAGC
GGGTTTCAAC TGGCTGAGGC AGAACCGCTA CAGCAAGGTT TAATTGGTAA GGTCAGTGAT
CCCCAGGCAG TAATGCAGTC TGTATTGACA TGGACAGGAG GACAACCATT TTTGACCCAG
AAAGTGTTGA ATTTGGTTGT CCAGCAGGTC AATTCGTCCT TGTCACCCCA GGAATTGGTA
GAACAAGTTG TCTGTGCCAA AGTGATCGAC AACTGGGAAA CCCAAGATGT ACCACCACAC
CTAAAGACCA TTCGTGACAG AATTTTGCAA AGTGATGAAC AAGGGCGAGG GCGTTTGCTC
GGTCTATATC AGCAGGTTTT AGATCAGGGA GGCATTGCTG CTGATGAAAG TTATGAGCAA
ATGCAACTGC GTTTAACCGG CTTGGTAGTC AAACGGGACG GCAAACTCAA TGTTTACAAT
CCCATTTATG CGGCAGTATT TAACCAGCAA TGGGTAGATA GGGCATTGGC GGATTTGCGT
CCGTCTTTTT ATGCGGAAGC CATGAAAGCC TGGCAAGAAT CCGATGAGCA AAAACAGTCA
TTTCTACTGC GGGGACAGGC GCTAGAAGAT GCCGAAGCCT GGGCAAAGGG TAAACGCCTC
AGTGATGAAG ATGACAGATT TTTACGGGAA AGCCGCGAGG TAGAAAAGCA AGACATTGAC
CGTAAACTAG AAGCGGAACG TCTAGCGCGG GAGACAGCAG AACAGGCAAA TCAAATCCTT
TTGGAGGCAG AGCAGACAGC GAAGGGGAAA GTGAGAGTTG GTTCGATAAT TTTGGCAGGG
ACACTAGTAG TTGCAGGGGT GGCGAGTGTC TGGGCAGGAA TATCTGTTAA TGATGCAAAT
GTTAAGGTTG CCAATACACA AAAAGAAGCA AAAGAATTAA CGGACAAGGC CAATCAGAGG
GTGAAAGAGG CAAATATTCA GGTTGCCAAT ACAAAGGAAG AAGCAAAAAA TCGAACGAAA
AAAGCAGATG ATGATGTTCG ACTAGCTCTT GAGAATTTAG GGAAAATAAC TAAACAAGCA
AAGATTGATA AAGAAACAGC AGCAAAAAGT CTGATTGAGG CACAAGTAAA GCAGAAGGAA
GCAAATCGGA AAGTTGAGCA AGCTAAAAAA GATTTGGCAG CAGCGAAGGC AGAGCTTAAA
AATGTAGACC GACAGTCGCA AGAAAAGGTG GCAGCAGCAC AGGCAAAAGT AACGGATGCA
GAAGCTAAGG TAGCACAAGC AATTCAACTG CGCGAAAAAG CTGAAAAAGA AGCTAGGGAA
GCTCAAGACA ATACGAGACT TGCACTGCAA GGTAATGCAC TAGAGCAGTC AGGAATTGTT
GCAATGCAAC AGTTTGATTC TGAAGAGTTG AACTCTTTAA TAAAGTCCAT AAGAAGTGCG
AGAAATCTAG AAAATTTAGT TAAAAATGGT ACCTCTTTAG AAAATTACCC AGCGTTTAGC
CCCTTATTTG CATTACAAAA AATACTCGAC AAAATTTTTG AGGTAAACCA ACTTACAGGA
CATCAGGGTT GGGTTAGGGG CATCCGCTTT AGTCCAAATG GAAGGCTTAT AGTCACTTCT
GGTTCGGATG GTACAGTCCG GATTTGGGAT TATTTAGGAA AACAGCAAAT CGAATTTAAG
GCTCACTGGG GCAGTATTTT AAGTGTAAAC TTTAGTCCAG ATAGTAAACT CATTGCCACA
GCATCAGATG ATGGAATGGT TCGGATTTGG AATCTATTAG GAGAGATGTT ATCTGAATAT
AAACATCAAA ATGTTATTCG TGATGTTGCT TTTAGTCCAG ATAGTAAATT CATTGTGACT
GGAGGTGAAG ATGGTGATAT TAATTTGTGG AGTTTGCAAG AAAAGCAAAA GATAAAGAAT
TGGATGGCAG AACAGGGTGC AATTTATAGT CTAAGTATTA GTTCAGATGG TCAATATATC
GCTACGGCAG GAAAGGATAG GATAGCTAAA CTTTGGAATT TAGTAGGACA AAAGCTATCT
GAATTTAAAA GTCCCAATGG TAGCTTTCGT AGTATAAGCT TTAGTCCCGA TGGAAGATTA
TTAGCTACCG CAGGTGATGA TAGTAAAGCA AGACTTTGGA AACTATCAGG TGAACAACTT
GCAGAATTTA AAGGTCATGT AGGATGGGTT AGAGATGTAA GTTTTAGCCC AGATGGAAAG
TTATTAGCCA CAGCAGGTGA TGATGGCAAG GTGAGACTTT GGCATCTATC AGGCAAGCAG
TTAATAGAAT TCAAGGGACA TCAAGGAGGG GTATTAAGTG TAAGATTCAG CCCAAATAAA
AAACTTCTGG CTACAACGGG TACAGATAGT AATGCTAAAG TTTGGAGTTT AGCAGGAAAG
CAACTTAATC CAGATGTGCT TTATTCTACT AGACCATTTT TGAAAAATAT AGAAGGGGAA
AGTAGTAATG AATGTTTTTC TTTATATGCA CCTGGATTAT ATCCAGAGCG AGTTTCTTCT
TCGCTTTTTG AAGATAATCA AGTTGGGAGA ATATCATTTG AGAATCGAAC AAGCAGAATT
ATTAAGGTTA AGCTCTACCA TCCAGATGTA CCTGGAATAG CATTTGGGGA GTACCCTGTA
GAAGCAAAAT CTATCTGGAC TTTCCCTCCA GAAGGGGAAG ATTATGGTTT TGGTAGTGAC
TGGGGAATTC AGGCAGATAA CTCTAAAATC TGCGTTCTTG GGCGAGTTTC TAACTGGAAT
CTTTCTAGTA ATAGTAAGAT TCCCCATATC TTTAAAACTT CATCAGACAG ATTCCCATTA
GGAGATTCTT TTGAAAATCA GAATATAGTA AACAGCGTAT CTTTTAATCC GAGTGGACAA
ATCCTGGCCA CTGCTGAACT CAATGGTATG GTAAGGTTTT GGGATCTCTC CAAAAAAGAA
TTAAGTCGAT GGAAAGCGAA TAATTATGGT GGGATTGTCA ACATAAATTT TAGTTCAGAT
GGAAAGTATG TTGCTACAGC AATCCCAGGT AAAGTTATAA TTTGGGATTT ATCAGGTAAG
CCAATTGTTC AGTATAACAA TACATATCAC GTCAGTTTTA GTTATGATAA TCGCTATTTA
GCGACAGTAT TACAAGCCAG TAATACCGAA CTTAGTAAAG TGCAGATTTG GAATTGGCAG
AATCCATCTC AGAAACAGCC AATAAAAGAA TGGCCATTAT CTCCGTCAAA AGACAGAGAT
GTTGGAGTTT ATAGCATGAA CTTTAGCCAA GATGGGCAGA AAATACTTAT TGCCGGTACT
TTGCAAGTTA ATCGATATAG TATTGTGGAC AGCCCAGTTC AACTTAGAGA TATTTCCGGT
AAGATGCTGG CTGAATTTAA GGGACATCGG GGGGGAGTAT TCAGCGCTAA CTTTAGTCCT
GATCAAAAAC AGGTTTTGAC AGGAGGAATG GACGGTACAG TTAGGCTTTG GGATTTATCC
GGTGTTCAAC AGAGTCAGTG GAAAGCTCAC AAGGGATGGG TGAGAAGTGT CATATTTATT
GATAATCAAC GTATTGCTAC AGTGGGAGAT GATGGATTGG TCAAACTGTG GAGTCGTTCA
GGACAACAAT TAGCTGAGTT TGCTGGTCAT CAGGGAAAAA TCAGTAGCAT AGCCTTCAGA
GCAGTTGATC AAACTATTGT TACATCAGGT TATGACGGTA CAGTAAGAAC CTGGCATATT
GACAACTTGA GCGAACTACT CAAAAAGGGT TGCGACTGGC TGCATGACTA TCTGTCCACA
AATCCCAATG TAACAGAGAG CGATCGCCAA ATGTGCGGTA TTGTGAAACA CTAA
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| Protein sequence | MTTSPEPQPA NHSTLFSYQV GGSLPIDNPA YVERQADREL YERLKAGEYC FVFNSRQMGK
SSLRVRAMQK LQQDGVVCAV IDPQTRGTTL REDQWYAGTI KRLIGDLHLQ DKIDFPGWWK
QLDGQSISVV ERFYEFIDQI LLPQTTQNIT IFVEEVDNLL SLKFDTDGFF ILIRSLYERR
AEKPDYTRLT FAFLGVATPS DLIRSRRSSS FNIGHAVEMS GFQLAEAEPL QQGLIGKVSD
PQAVMQSVLT WTGGQPFLTQ KVLNLVVQQV NSSLSPQELV EQVVCAKVID NWETQDVPPH
LKTIRDRILQ SDEQGRGRLL GLYQQVLDQG GIAADESYEQ MQLRLTGLVV KRDGKLNVYN
PIYAAVFNQQ WVDRALADLR PSFYAEAMKA WQESDEQKQS FLLRGQALED AEAWAKGKRL
SDEDDRFLRE SREVEKQDID RKLEAERLAR ETAEQANQIL LEAEQTAKGK VRVGSIILAG
TLVVAGVASV WAGISVNDAN VKVANTQKEA KELTDKANQR VKEANIQVAN TKEEAKNRTK
KADDDVRLAL ENLGKITKQA KIDKETAAKS LIEAQVKQKE ANRKVEQAKK DLAAAKAELK
NVDRQSQEKV AAAQAKVTDA EAKVAQAIQL REKAEKEARE AQDNTRLALQ GNALEQSGIV
AMQQFDSEEL NSLIKSIRSA RNLENLVKNG TSLENYPAFS PLFALQKILD KIFEVNQLTG
HQGWVRGIRF SPNGRLIVTS GSDGTVRIWD YLGKQQIEFK AHWGSILSVN FSPDSKLIAT
ASDDGMVRIW NLLGEMLSEY KHQNVIRDVA FSPDSKFIVT GGEDGDINLW SLQEKQKIKN
WMAEQGAIYS LSISSDGQYI ATAGKDRIAK LWNLVGQKLS EFKSPNGSFR SISFSPDGRL
LATAGDDSKA RLWKLSGEQL AEFKGHVGWV RDVSFSPDGK LLATAGDDGK VRLWHLSGKQ
LIEFKGHQGG VLSVRFSPNK KLLATTGTDS NAKVWSLAGK QLNPDVLYST RPFLKNIEGE
SSNECFSLYA PGLYPERVSS SLFEDNQVGR ISFENRTSRI IKVKLYHPDV PGIAFGEYPV
EAKSIWTFPP EGEDYGFGSD WGIQADNSKI CVLGRVSNWN LSSNSKIPHI FKTSSDRFPL
GDSFENQNIV NSVSFNPSGQ ILATAELNGM VRFWDLSKKE LSRWKANNYG GIVNINFSSD
GKYVATAIPG KVIIWDLSGK PIVQYNNTYH VSFSYDNRYL ATVLQASNTE LSKVQIWNWQ
NPSQKQPIKE WPLSPSKDRD VGVYSMNFSQ DGQKILIAGT LQVNRYSIVD SPVQLRDISG
KMLAEFKGHR GGVFSANFSP DQKQVLTGGM DGTVRLWDLS GVQQSQWKAH KGWVRSVIFI
DNQRIATVGD DGLVKLWSRS GQQLAEFAGH QGKISSIAFR AVDQTIVTSG YDGTVRTWHI
DNLSELLKKG CDWLHDYLST NPNVTESDRQ MCGIVKH
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