| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4809 |
|---|
| Symbol | |
|---|
| ID | 3679424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 6043702 |
|---|
| End bp | 6044487 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637720166 |
|---|
| Product | RDD |
|---|
| Protein accession | YP_325301 |
|---|
| Protein GI | 75911005 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1714] Predicted membrane protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000284972 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.915687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTGT TTAACCGTGT CAAATACCGC ACACCAGAAA GTGTAGAGAT AGAATTTACC
GTCGCTGGTA TTGGTAATCG TGCTTGGGCT TTAATCATTG ATTATTTGAT TTTAGCTGCG
ACTTGGGTGG TATTCTTCCT TGTCTGGGCT TTTATTTCTG CTCAGTTAGT AGATTGGTGG
ACAGAAACTT TCGGTTCGGC GACGGCTGTT TGGCTAGTAG CGATCGCATT TATTGTTAGC
TTTGTCATGT ACACGGGCTA CTTTGTCTTT TTTGAGACTT TATGGCAAGG CCAAACCCCC
GGTAAACGCT CAGTTAAGAT TCGCGTAGTT CGAGATGATG GCAGACCAGT TGGTTTACAA
CAAGCTACTC TGCGAGCTTT ATTACGACCT TTCGATGAAT TTCTGTTTAT TGGGGCTTTT
TTAATTATTT TTAATAGCAA AGAAAAGCGT CTTGGTGATT TAGCCGCAGG CACAATTGTT
ATTCAAACGG AAACACCAAC TACTCCAGCC ACTTTCACTA TTTCTGAACA AGCCAAGTCA
CTCTATGCGG AATTATTACA AATTACTGAC TTATCAAGGT TATTACCCGA TGACTTTGCT
GTAATTCATG AATATCTACA GCGACGTAGT GCAATGAGTG ACAAAGCCAG AAGCGTCTTA
TCTATCAAAC TAGCCGAACA AGTTCAAGCA ATTCTGCACT TAGAAACATT ACCCGCAACT
GTGACCTCTG ATGTATTTTT AGAAGCTATT TACCTTGCTT ATCGTGGGGC GGCAAGTGGG
GAGTAG
|
|---|
| Protein sequence | MHLFNRVKYR TPESVEIEFT VAGIGNRAWA LIIDYLILAA TWVVFFLVWA FISAQLVDWW
TETFGSATAV WLVAIAFIVS FVMYTGYFVF FETLWQGQTP GKRSVKIRVV RDDGRPVGLQ
QATLRALLRP FDEFLFIGAF LIIFNSKEKR LGDLAAGTIV IQTETPTTPA TFTISEQAKS
LYAELLQITD LSRLLPDDFA VIHEYLQRRS AMSDKARSVL SIKLAEQVQA ILHLETLPAT
VTSDVFLEAI YLAYRGAASG E
|
|---|
| |