Gene Ava_4764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4764 
Symbol 
ID3679495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5989196 
End bp5991436 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content42% 
IMG OID637720120 
ProductSerine/threonine protein kinase with Chase2 sensor 
Protein accessionYP_325256 
Protein GI75910960 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.272035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTATTG GAATATCAAA CAAACTCCGC GCTGCTTTCA TTAAGGATAA AAGTTACCGT 
GACACTGCTG TTAACAAGAA CTGGTGGCAA ATAATTTTAG TCACTAGTTT GGGAGTCACG
GCTTTGGTGT GGGGAGTTAG GGAACTGAAA TGGTTACAGT CTTGGGAATT AAAAGCTTAT
GATCAGATGT TGCGATCGCG TCCTGCTGAA CCACCTGACT CACGAATTTT ACTAGTCACA
GTTACTGAAG AGGATCTAGC AAAAAAAGGT TGGAATTTAG CTGATGATAC CATCAATCGA
CTGTTAACTA AACTCGCATC CTATCAACCC CGTGTCATTG CTCTCAATCT ATACCGACCA
GAGCAGACAA ATCTAGGGGC AGGGCTGGAA AATCCCACCA ATATTATCAG CGCCTGCTTA
TCAAGCAGTA TGGGTAGGTC AGAAGTACCA CCACCGCCAA ATTTCCCGCC GGAGAATATC
GGCTATAACG ATGTGATTTC TGATATTGAG GAAGACCAAG TTGTTCGCCG TGCTTTGGTG
TTTTCTGAAG CCAATGATAG TAAATGTGCG ACACAATTCT CAATTGCAGC TTTAGCCGCA
ATTACATACC TAGAACAAAC AGGTATTCAC GTCGATTTTG AAAAACACCA ATTTCATCTT
GGTAAAACCG CCTTTCCCAT CCTGACACCT AATTCCGGTA GTTACAAAGG TGTGGATGCT
AAAGGTTATC AAATATTACT CAATTATCGT CATCCTAATC ATTTAGCGCC AACATTCACC
CTGACAGAAG TTTTAAACAA CCAAGTTAAC CCTAACTTAG TCAAAGACCG TTTGGTAATT
ATTGGCACCA CTGCATCTAG TATTCATCCA GGTTTATATA CACCTTATAG TGCCGCAAAA
GGGCAACCAA CCAGAACCCC ATCAGTTTTT ATACATACAC AAATCGCTAG TCAGCTACTG
AGTACAGTAT TAGATGGACG ACCTCTGATT TGGTACTGGC CTGACTGGGC TGAATTGGTT
TGGCTGTGGG CTTGGTCATT AGTAGGTAGC ATTTTGGCGT GGCGGCTCAA GCATCCTTTA
CTAGTCGTCG TAGTTTTAGG TATAGCCTTA ACGGGTTTAG TAATAATTTG CGCTGGTTTA
TTTCTGGACG CTGGGTGGAT ACCTTTAATT CCACCAGCTT TAACTTTAGT TATGAGTGGA
GTGAGTGTGA TAATTTATAG GACTTACCGC ACTCAGCAAC AAACTAAGGT AATCATGTTG
CAAGTGGAGA AACAACAAGA GGTAATTGAG CAGTTAAACA TCCTCTTGAA CGAAGCAACA
GCAATAGCAG ATACTACAGC GTTCTATGAC CAACACTCTC ACCATGATTC TGTTGTGGTC
ACACCCAGAA AAAAAGCTGA TGATTTATTA TTGGGTGGTC GTTATTCCAT TTCCAGTGTA
CTGGGTGCTG GTGGATTCGG TCGTACATAT CTAGCACAAG ATACTCAAAG ACCAGGGAAT
CCTACTTGTG TGGTAAAAAA GTTAATGCCA GCACGCAAGG ATACAAAGTT TTTGCAAGTA
GCACGGCGTT TGTTCATTAC AGAAGCAGAG ATTTTAGAAT CTTTGGGTCA GCATCAGCAA
ATTCCGGCGC TGCTGGCTTA TTTTGAAGTG AATGAAGAAT TTTATTTAGT AGAACAGTAT
ATTGCTGGGC ATACTTTGTA TGAGGAATTA CCACCTGTCA CAGGTTTACA GAGTGAAGCT
TTTGTTATAG AAATGCTCAA AGGAGTTTTA GAGGTTTTGG CATTTGTACA CGAACATCGG
GTAATTCATC GGGATGTCAA ACCAACTAAT ATTATTAGGT CGGCGGAAGA TAATCGCTTA
GTATTAATCG ATTTTGGTGC AGTCAAGTTG ATGCAGCCAC CAACTGATCA AAAAACAGAA
TTAGCTACGG TAGCCATCGG GACACGCGGT TATGCACCAC CAGAACAATT TGCAGGACAT
CCCCGTTTGG CTAGTGATAT TTACGCTGTG GGGATGATGG GGATTCAAGC ACTCACGGGA
ATATTACCCC AAGAACTTCC ACCAGACCCG GAAACGGGAA ATGTGATGTG GCGGAGTCAT
GCCACAGTTA GCGAAGAACT AGCACTAATT TTAGATAAGA TGGTGCGTTA TCATTTTAGC
GATCGCTACC AATCTGCTGC TACTGTCCTA CAAGATTTAA ATCGCCTTTC TAGCTTGATA
CAGACATCAT CCATTTCCTA A
 
Protein sequence
MIIGISNKLR AAFIKDKSYR DTAVNKNWWQ IILVTSLGVT ALVWGVRELK WLQSWELKAY 
DQMLRSRPAE PPDSRILLVT VTEEDLAKKG WNLADDTINR LLTKLASYQP RVIALNLYRP
EQTNLGAGLE NPTNIISACL SSSMGRSEVP PPPNFPPENI GYNDVISDIE EDQVVRRALV
FSEANDSKCA TQFSIAALAA ITYLEQTGIH VDFEKHQFHL GKTAFPILTP NSGSYKGVDA
KGYQILLNYR HPNHLAPTFT LTEVLNNQVN PNLVKDRLVI IGTTASSIHP GLYTPYSAAK
GQPTRTPSVF IHTQIASQLL STVLDGRPLI WYWPDWAELV WLWAWSLVGS ILAWRLKHPL
LVVVVLGIAL TGLVIICAGL FLDAGWIPLI PPALTLVMSG VSVIIYRTYR TQQQTKVIML
QVEKQQEVIE QLNILLNEAT AIADTTAFYD QHSHHDSVVV TPRKKADDLL LGGRYSISSV
LGAGGFGRTY LAQDTQRPGN PTCVVKKLMP ARKDTKFLQV ARRLFITEAE ILESLGQHQQ
IPALLAYFEV NEEFYLVEQY IAGHTLYEEL PPVTGLQSEA FVIEMLKGVL EVLAFVHEHR
VIHRDVKPTN IIRSAEDNRL VLIDFGAVKL MQPPTDQKTE LATVAIGTRG YAPPEQFAGH
PRLASDIYAV GMMGIQALTG ILPQELPPDP ETGNVMWRSH ATVSEELALI LDKMVRYHFS
DRYQSAATVL QDLNRLSSLI QTSSIS