| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4744 |
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| Symbol | |
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| ID | 3679631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5953329 |
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| End bp | 5954804 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637720100 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_325236 |
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| Protein GI | 75910940 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAGTC AGAGTTGCCA TCAAATTAAT GTTGCCCAAA CTCCTTTATG GGGTATGGGT
CAGGTCATAG CCCTAGAATA TCCCCACCTT TGGGGAGGAC TAATTGATTT TGGCAAGCAG
GATGTTTTTG CAACTGCCAT GATCGCAGAG ATGACCGCAA AAACTGGAGA AGACCGGGTG
GCATTTCGGG ATGGTAAACG GTATGTTGCC CGCTTGATGC CTATTTCCGC CCCATTACCC
ACACCCCAAC CCTTAATTAG TGATGGCAGT TATTTAATTA CAGGTGGTTT AGGGGCTTTA
GGACTCACTC TAGCAGAATG GTTGGTGCAA CAGGGCGCGC GTCATTTAGT TTTAACTAGT
CGTCAAGGGC TGTTAAATCA ATCTGAGGAG AAACAACAAA AAATCCGTGC CTTAGAAAAC
CAAGGGGCAA CTGTCAAAGT TGTAGCGGCT GATGTGAGTG ATTATCAGCA AATGTCTCAA
CTATTTGCGG AAATACAGTT AAATTCTCCC AAGTTGCGTG GAATTATTCA CGCAGCCGGG
GTATTAAATG ATTGTTCGAT TTCCCAAATG GATTGGGAAA CCTTTGCCAA GGTATTTCAG
CCCAAAGTTA CAGGTGCATG GAATCTCCAC CAACTCACCC AGGACTTATC TTTAGACTTC
TTTGTTTGTT TTTCTTCCAT GTCTGCACTA CTGGGTTCGC GGGGTCAACT TCATTATGCT
GCTGCCAACT CTTTCTTAGA TGGGCTAATT TACCACCGTC AGACCTTAGG TTTACCAGGC
TTAAGCATTA ATTGGGGGCC TTGGGCTGAG GGAGGTATGG CTACCCAAGG TTATGAGGTG
GGCTTAAAAC GGATGGGGAT TGAACCCTTA GAACCCACAG CCGCCCTGCA AGTCCTCGGT
GGTTTGTTGG GGAGTGCATC GGTGCAGACG ATGGTAGCAG CCATTAATTG GTCGGCTTTT
GGGAAGATTG TTGCTGCCAA AGGACGAGTA GCTTTTTTAG CAGCACTATT GACCCAAGAA
AGTCAAGATG GCAGCAATGG TGAGAGTTTT TGTCAAAAAT TAGCAGCCGC ACCCCTTCAT
AGACGAGCTG CTTTACTCAC CACCCAAGTA CAACAAGAAG TTGCCCAGGT ATTAGGTCAC
AGTGGGTCTT ATGTCCCGGA AATTGAGCAG GGCTTTTTCG ATATGGGGAT GGATTCTCTG
ATGTCTGTGC AATTGCGCCA TCGTCTCGAA GCTTTGCTTG CTGTATCTCT ACCCTCAACT
TTGGTATTTG AATGCCCCTC TATTGGTGAT GTGGTGAGTT ATTTAATGCG GGAAGTGTTT
GCTTGGCAAC TCGATGGTAG TGATGGGTCT GCGATGGAAT CACCAGCCAG CCTAGTTATA
GAAAATACGA TCGCCCAACT AGAGGGATTA TCCACAGCAG AAACTGAAGC CCTGATGGAA
CAAGAAATCG CCGAATTACA AGCATTGCTG TCTTAA
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| Protein sequence | MKSQSCHQIN VAQTPLWGMG QVIALEYPHL WGGLIDFGKQ DVFATAMIAE MTAKTGEDRV
AFRDGKRYVA RLMPISAPLP TPQPLISDGS YLITGGLGAL GLTLAEWLVQ QGARHLVLTS
RQGLLNQSEE KQQKIRALEN QGATVKVVAA DVSDYQQMSQ LFAEIQLNSP KLRGIIHAAG
VLNDCSISQM DWETFAKVFQ PKVTGAWNLH QLTQDLSLDF FVCFSSMSAL LGSRGQLHYA
AANSFLDGLI YHRQTLGLPG LSINWGPWAE GGMATQGYEV GLKRMGIEPL EPTAALQVLG
GLLGSASVQT MVAAINWSAF GKIVAAKGRV AFLAALLTQE SQDGSNGESF CQKLAAAPLH
RRAALLTTQV QQEVAQVLGH SGSYVPEIEQ GFFDMGMDSL MSVQLRHRLE ALLAVSLPST
LVFECPSIGD VVSYLMREVF AWQLDGSDGS AMESPASLVI ENTIAQLEGL STAETEALME
QEIAELQALL S
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