Gene Ava_4726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4726 
Symbol 
ID3679706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5913695 
End bp5916175 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content40% 
IMG OID637720082 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_325218 
Protein GI75910922 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2931] RTX toxins and related Ca2+-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTA ACGGCACTTC TGGTGTGGAT GAGTTATATG CCAATAAAGA TAACCAAGTT 
TTTGGTTGGG AAGGCGATGA TATTCTAGAT GCTTCTAACG GTGAAGGAAA TAATTTATTA
GCGGGTGGTG CTGGTAGCGA TCGCCTTTTT GCCAACAATA ATGATACCCT CAAAGGTGAC
GCTGGCGAAG ATTATCTATA TGCGTTGGGT AGTCTAGGCT TCAATACACT AGAAGGTGGT
GATGATAACG ATCAGCTGTT TGTAGTCGAG GGTGGAAATA ACACCCTGGA TGGAGGACAA
GGAAGCGATC GCCTGATAGT TTTAGATGGT AGTGGTTACA ATACCCTCGC TGGGGGACTG
GGAAACGATT TATTAGATGT CTCTAACGGT ACAGGCAATA ACATCCTCTA CGGTAATGAG
GGCGATGATA TCCTGATTGG TGGAGTCAAT ACTGACCGAT TATTTGGTGG TGCTGGAGAT
GATTTACTCT TCGGTGGTAG AAGAGGTAGC CAATTAACCG GAGGTACAGG CTTAGATAGA
TTTTTCCTTA CCAGTGCAGC AGTTCCCGAA GTCCCCATCG AAGTATTAGA CTTTACTAAA
AATGACGATA AAGTTATAGT TGCCGGTATC CCTGAAGTGC GGACATTCCA AGATTTGCAA
TTGCAGCAGA CCGGTGCTGA TACAGTTGTC AAAGCTAGAA TAAATAATAC TGTGCGAGAG
TTAGGCATTT TGAGAAACAT CCAAGCCAAC ACTCTAACAC CAGATGATTT TGACTACACA
ACCGCTATTT TCTCTACTAC CAACTCTTTT GCCACCGAAG GCACTAGCAT CACCTTCACC
ATTAACCGTA CAGCAGATAC CCAAACTCAG CAAACTGTGA CGGTATCTAC ATCTATAACC
ACAGGAGACA CAGCTAGTAA TACTGACTTT GTAGCCAAAA CCCAAACCCT GACTTTTGAA
CAGGGAGAAA CCCAGAAAAC TTTTACTGTA GACACCACTC AAGATTTCTT AGTTGAAGCA
AACGAAAGCT TTACCGTCAG TTTGAGCAAT CCTACTAATG GTGCAATTCT CAGTCCTACA
GCAGCCACAG CTAAAGGCAC TATCAACGAT GATGATAATG CAGATGTCAT CATTACCCAG
ACTGGTAATA ACACTATAGT TACAGAAAAT GGGACAACTG ATAGTTACAC CATAAAACTC
ACTAGTCAAC CTACATATGA TGTCATTATC AATATCAGTA ATGGTCAACA AATTCGTACT
AATCCCAGAA CTTTGACCTT CACTACCGAA AATTGGAATG TAGCGCAAAA TGTCACTGTA
ACAGCAGTAG ATGATTTCCT AGTAGAAGGT GACGGTAATG ATACTATTAC CCATACTGCT
ATCAGTAACG ATGTCAATTA CAATAACATT CTCATAAATC CTATAGAAGT AGGCATCACT
GATAACGATA TCCCACTATT TCAGAACCCT AACAGCGATA TCTTTACCAT CAAAGGCAAC
AGTGACAAAG TAAATCTCCA AGTCACTCTT ACAAGACGCA ATTCCAATTT TACCAATGAA
TTAAGCGTCT TTACAGTAGA TGATGCTAAT GGCACCATTA ATGGTATTGC TCCTGGTGCA
GTCGGTTATA CTGAAGCAGC GCTACAACGT GCCAGAGTAA TTTTCTCAGC TATAGCTAAC
AACCCAAACG GATTTAACTC CAATAATCTA GCTAGTTTGT TGGAATTTAA TTCTGGCGAT
AATTTGAGGT TTTATTTAGT CAGAAATAGT AGTACAGATG CCGTACTAGC AGGAATCACA
CCCATCTCAG ATGTAGTATT GGCTAATTCC TCAACCCAAA AAATTACCAA CTTAGGAACA
GATGGGTTTT CCTTAGGATG GGAAGACGGA TTTGGTAATA ATAGTGGATT TGCAGATTTA
GTAGTCAAGA TTCAGACGAC AAATCAAACT TTACCTTTAG GTGCAAATTT ACAAAGTCAA
TCACAGGGAG AATTGATTGA TTTACGAGGG GTGACACAAT CAGTAAAAGC TGATTTTGTT
GTTAATAGAG AAGCGGCTTT CAACAACTTC ATCGGCTTCT ATCAGGTGAC TGATGAGAAT
GGTGGTATTG ACACCAATAA TGATGGTTCC GCAGATATTC TCCCTGGACA ATCTGGTTAT
ACTCAAGCTG CTGTTAATGG TCGTGTTCCT GGGATTGATT TGGTCGTGAA TAACCGAGGA
ACTGCAACTT ATACTGGCAC GTTCCAACCC GGTTCTTTAT TTGCACCATT CATCATTATT
AATAGTAGAC CAGAGACAAT TTTAGATAAC AATCCCAATA ACGACCCAGC CGTATATTTT
TTATTCTTGG GCGCTAACCG TAATAGAGTT GATCATATTC GTCTATTGGC AAACAATGTC
TTTGGCTTTG AGGATTTACC AAATGGTGGA GATAAAGACT TCAATGATAT GATTGTGCGA
GTCAATCTAA GTATTGCTTG A
 
Protein sequence
MIINGTSGVD ELYANKDNQV FGWEGDDILD ASNGEGNNLL AGGAGSDRLF ANNNDTLKGD 
AGEDYLYALG SLGFNTLEGG DDNDQLFVVE GGNNTLDGGQ GSDRLIVLDG SGYNTLAGGL
GNDLLDVSNG TGNNILYGNE GDDILIGGVN TDRLFGGAGD DLLFGGRRGS QLTGGTGLDR
FFLTSAAVPE VPIEVLDFTK NDDKVIVAGI PEVRTFQDLQ LQQTGADTVV KARINNTVRE
LGILRNIQAN TLTPDDFDYT TAIFSTTNSF ATEGTSITFT INRTADTQTQ QTVTVSTSIT
TGDTASNTDF VAKTQTLTFE QGETQKTFTV DTTQDFLVEA NESFTVSLSN PTNGAILSPT
AATAKGTIND DDNADVIITQ TGNNTIVTEN GTTDSYTIKL TSQPTYDVII NISNGQQIRT
NPRTLTFTTE NWNVAQNVTV TAVDDFLVEG DGNDTITHTA ISNDVNYNNI LINPIEVGIT
DNDIPLFQNP NSDIFTIKGN SDKVNLQVTL TRRNSNFTNE LSVFTVDDAN GTINGIAPGA
VGYTEAALQR ARVIFSAIAN NPNGFNSNNL ASLLEFNSGD NLRFYLVRNS STDAVLAGIT
PISDVVLANS STQKITNLGT DGFSLGWEDG FGNNSGFADL VVKIQTTNQT LPLGANLQSQ
SQGELIDLRG VTQSVKADFV VNREAAFNNF IGFYQVTDEN GGIDTNNDGS ADILPGQSGY
TQAAVNGRVP GIDLVVNNRG TATYTGTFQP GSLFAPFIII NSRPETILDN NPNNDPAVYF
LFLGANRNRV DHIRLLANNV FGFEDLPNGG DKDFNDMIVR VNLSIA