| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4701 |
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| Symbol | |
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| ID | 3679720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5874401 |
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| End bp | 5878225 |
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| Gene Length | 3825 bp |
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| Protein Length | 1274 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637720057 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_325193 |
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| Protein GI | 75910897 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0613664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.609464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACT GCACAACGTC TCTCACCCAA TCAGAACTGA AATCAGCGAT CATTCGTGAT
CCCCTGATCA TCAAACCGGA GACAACGGTG ATGGATGCGA TCGCCCAAAT GAGTGCCGTG
CGGGCTATCT GTGATACAGA TAAACTGGAT GAAGTCCATC TAGAGGCACG ATCAAGCTGC
GTGTTGATAG TGGAAGCTGG GAGACTATTA GGTATCTTCA CAGAGCGGGA TGTAGTCAGA
CTGTGTAGCC AGAGGCGTTG TTTGGAGAAT TTGGCGATTC GAGAGGTGAT GATTCACCCA
GTTGTCAGCC TGCATGAGTC TGAGTTTACC GATTTGTTTT TTGCTGTTAA TTTGCTTCAA
CAGTACCGTA TTCGCCACAT CCCTATTCTA GACGAGGAGG AGCGGGTGGT GGGGCTGCTA
ACCAATGAAA GTCTACGGCA AACTTCTCGC TCTGTGGATC TGTTGCGGTT GCGTCTGGTG
TCGGAGGTGA TGACCTGTGA GGTGATTTGT GCTGCACCAG ATAGTTCTAT GTTGGCGATC
GCCCAACTCT TGACAGAGAA CCGTGTCAGT TCCGTGATGA TTGTGCAACT TTGTGAGTGT
CCAGCCAACC CCCAAAAAAT TCCGGTGGGA ATTGTCACCG AGCGGGATAT TGTCCAGTTT
CAGGCATTAG GCTTGAATCT GGAAACCTGT CAGGTTCAGA CGGTGATGAG TACGCCGATT
TTTGCCGTTA GACCAGACTA TTCTCTGCGG TTCGTACAGC AGATAATGGA GCAGCGTTTG
ATTCGTCGGT TGGCAGTGAC AGGAGAGCAG GGGGAGTTAT TAGGCATCGT TACCCAAAGT
AGTTTACTGC AAGCCCTTAA CCCTTTAGAG GTATACAAAC TAGCCCAGAT GTTGGAAGAA
CGGGTGGTGA GGTTAGAGAC AGAGAAGGTT CAACTGCTGG AAAATCGCAC TGTTGAGCTA
GAGCAGCAAG TTGCAGATCG GACAGCTAGC CTCAAGGCTA AGGCAGGTCG GGAACAGATT
TTGTCTGATA TCTCCAGACA AATTCGCTCT TCTCTCAGTT TACAAACCAT TCTGGATACA
ACCGTGGAGC AGGTGCGGCA ATTGCTGGGT TGCGATCGCG TCAACATTTG GCATTTTGAA
GCAGAGTGGG AAAGCATCGT GATGGCAGAG TCTACCACAT CTTCCAGATC ATTACTGGGC
AAACGGATTC AGGAAATCTG CTTTCAGCAA CGCTGCGCGG AGCTTTATCG CTATGGGCGG
ATTCGCATCG TCCCAGATAT CTACACCACA GAAATGACAG ACTGTCACCG GGAGTTGCTA
ATCCGCCTCC AAACGCGAGC CAAAATTTTA GTACCCCTGC TGTGTGGCGA TGAACTGTGG
GGTTTGCTCA ATGTCACCGA AAGCCAGCAC GCCCGCGAGT GGCAAACTGA AGAAATCGAA
CTGCTGCAAG GGTTATCTGT ACATCTGGCT ATCGCCATTC AGCAAGCTAC TACCCACCAA
AAATTGCAGG AGCAACTAAT CGCCCTTCAG GAAGGGTCAG ATCGACTACA AGAAAGCGAA
CAGCGTTATA TCGCCCTCAA TCAAAACCTA GAAGCTAAAG TTGAAGAACG CACGGCTGAA
CTCCAAGCAC GAGAAGCACA ACTCCAGAAA ATATCCGAGC GCCTGGCTTT GTCCCTCAAA
TCTGCGGCCA TCGGCTGTTG GGACTGGGAT ATTGGTGAGA ACACCATCTT TTGGGATGAG
CGGATGTACG AACTCTATGG TGTTACCAAA ACAACTGATT CACGTTTAGT CTACGACACT
TGGGCAAATG GGCTACATCC TGATGACCGC ACCAATACAG AAATATTAGT CCAGCAAGCA
GTTTTAGGAC AAGCAGAATA CGATACTGAA TTTCGTGTCA TACATCCTGA TGGCAGTATC
CACTTCATCA AAGCCTATGG TGTGGTGGTG CGAGATGCTG AGGGTAATCC CCAGAAAATG
ATTGGAGTCC ACTTTGATAT TAGTGATCGC AAAAAGGCTG AGGAAATTAT TCGCCAACAG
GCAGAAAGAG AGAAACTGCT GCGAGAAATT ACCCAGAGGA TTCGTCAATC CCTAGACCTC
CAGACCATTT TTGACATCGC TTGCCAGGAC ATCCGTCAAG TGATTCAGGC TGATCGGGTG
GGCATTTTCA AGTTCTATCC CGAATCCAAC TTTAATGACG GCGAATTTGT GGCTGAATCT
GTTGTAGACG AGTTTCCCTC AGTCATCGCA ATTCGGGTAC ACGACCAGTG CTTTGGGGAA
AACTATTCCT CTCTCTACGC TTTGGGCAGG TCTTATGTGG TTGATGATAT CTATAACAGT
GACATGACAA CCTGCCACAC TGATATCTTG GCTCAGTTTC ATGTGCGTGC CAATGTGATT
ATGCCCTTAC TTTGCGGTGC TGAGTTATGG GGTTTGCTGT GCATTCATCA GTGCGCGACA
ACTCGCCACT GGGAGCAGTC AGAAATTGAT TTTACCCAAC AACTTGCCAC CCAGTTAGCG
ATCGCCATTC AACAAGCAAG TCTGGTTGAG CAATTACAGC AAGAACTGGC CGAAAGACAA
CAGGCAGAAC TCAAGCTCAC CCAGAGTAAT CAACAACTAG CCATTTCTAA CCAAGAACTC
GCCCGTGCTA CTCGCCTCAA AGATGAATTC CTGGCTAACA TGAGCCACGA ACTCCGCACC
CCCCTCAACG CCATTCTCGG CATGACCGAA GGGTTACAAG AAGGAGTTTT TGGCATGATC
AACGATAAAC AATTCAAAGC CTTGGAAACC ATTGAGCGTA GCAGCTCTCA TTTACTGGAT
TTGATCAACG ATATTCTCGA TGTAGCGAAA ATTGAAGCCG GACAGATCAA ACTAGATTGC
ACTGCAATTT CAGTAGCGGC TCTGTGTCAA TCCAGTCTGG TATTTATCAA ACAGCAAGCA
TTGCAAAAAC GGATTCAAGT GGAAATCAAA ATTCCGCTCA ATTTACCTGA CCTGTTTGTT
GATGAACGCC GGATTCGTCA GGTGTTAATT AACCTGCTCA ATAATGCGGT CAAATTCACG
CCGGAGACAG GACGCATTTC CCTAGAAGTT ACCCAAGTTT CCCCCGATAT ATCCACAGTG
CAGAACTTTT TGCAAATTGC CGTGATCGAT ACAGGCATTG GCATTATGCA GGAGAATATC
AACAAGCTAT TTCAGCCCTT CATCCAAATT GATAGCGCAT TAAATCGTCA ATATGAGGGT
ACAGGCTTGG GATTGGCATT GGTGAAAAAA ATTGTCGAAC TCCACGGTGG TAGGGTGGGT
TTAACCAGTG AGCTGGGTGT AGGCAGCTGC TTCACAATTG AACTACCTTG TACTCCCAGT
ACTCCCTCAT CACCCGAACT AATTCGGGAT TTATTAACTA CCCCTAATTC AGAACTGGAC
TTTGCCAATG CTGAAGAAGC CGCAAGCCTT GCCCCTGTAA TCTTGCTAGC CGAAGATAAT
GAAGCCAATA TCAAAACATT TTCTAGCTAC CTCAGTGCCA AAGGCTATGG CATTTTGTTA
GCAACAAATG GTGAACAAGC CCTAGAACTG GCCACAATCC ACCAGCCCGA CTTGATTTTG
ATGGATATCC AAATGCCGGG AATCGACGGT CTAGAGGCAA TCCGACAGAT TCGCCTTGAT
CCTGAGTTGG TGAATATTCC CATTGTGGCA CTCACGGCCC TGGCAATGAC TGGCGATCGC
GATCGCTGTT TACAAGCAGG AGCCAATGAC TACCTGACTA AACCAGTTAA GCTCAAGCAA
CTGGCCACCA CCATTCAACA GCTTTTAATG GAAACAAAAA AATGA
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| Protein sequence | MFNCTTSLTQ SELKSAIIRD PLIIKPETTV MDAIAQMSAV RAICDTDKLD EVHLEARSSC
VLIVEAGRLL GIFTERDVVR LCSQRRCLEN LAIREVMIHP VVSLHESEFT DLFFAVNLLQ
QYRIRHIPIL DEEERVVGLL TNESLRQTSR SVDLLRLRLV SEVMTCEVIC AAPDSSMLAI
AQLLTENRVS SVMIVQLCEC PANPQKIPVG IVTERDIVQF QALGLNLETC QVQTVMSTPI
FAVRPDYSLR FVQQIMEQRL IRRLAVTGEQ GELLGIVTQS SLLQALNPLE VYKLAQMLEE
RVVRLETEKV QLLENRTVEL EQQVADRTAS LKAKAGREQI LSDISRQIRS SLSLQTILDT
TVEQVRQLLG CDRVNIWHFE AEWESIVMAE STTSSRSLLG KRIQEICFQQ RCAELYRYGR
IRIVPDIYTT EMTDCHRELL IRLQTRAKIL VPLLCGDELW GLLNVTESQH AREWQTEEIE
LLQGLSVHLA IAIQQATTHQ KLQEQLIALQ EGSDRLQESE QRYIALNQNL EAKVEERTAE
LQAREAQLQK ISERLALSLK SAAIGCWDWD IGENTIFWDE RMYELYGVTK TTDSRLVYDT
WANGLHPDDR TNTEILVQQA VLGQAEYDTE FRVIHPDGSI HFIKAYGVVV RDAEGNPQKM
IGVHFDISDR KKAEEIIRQQ AEREKLLREI TQRIRQSLDL QTIFDIACQD IRQVIQADRV
GIFKFYPESN FNDGEFVAES VVDEFPSVIA IRVHDQCFGE NYSSLYALGR SYVVDDIYNS
DMTTCHTDIL AQFHVRANVI MPLLCGAELW GLLCIHQCAT TRHWEQSEID FTQQLATQLA
IAIQQASLVE QLQQELAERQ QAELKLTQSN QQLAISNQEL ARATRLKDEF LANMSHELRT
PLNAILGMTE GLQEGVFGMI NDKQFKALET IERSSSHLLD LINDILDVAK IEAGQIKLDC
TAISVAALCQ SSLVFIKQQA LQKRIQVEIK IPLNLPDLFV DERRIRQVLI NLLNNAVKFT
PETGRISLEV TQVSPDISTV QNFLQIAVID TGIGIMQENI NKLFQPFIQI DSALNRQYEG
TGLGLALVKK IVELHGGRVG LTSELGVGSC FTIELPCTPS TPSSPELIRD LLTTPNSELD
FANAEEAASL APVILLAEDN EANIKTFSSY LSAKGYGILL ATNGEQALEL ATIHQPDLIL
MDIQMPGIDG LEAIRQIRLD PELVNIPIVA LTALAMTGDR DRCLQAGAND YLTKPVKLKQ
LATTIQQLLM ETKK
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