Gene Ava_4642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4642 
Symbol 
ID3679857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5805884 
End bp5806192 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content49% 
IMG OID637719998 
ProductRNA-binding region RNP-1 
Protein accessionYP_325134 
Protein GI75910838 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0167628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0600558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTT ATGTAGGCAA CCTCTCTTAC GAAGTTACCC AAGACACCTT AAGTGCCGTT 
TTTGCAGAAT ACGGTACTGT AAAGCGTGTT CAACTACCTA CTGACCGCGA AACAGGACAA
CCACGGGGTT TTGGTTTTGT GGAAATGGGA AGTGAAGCTG AAGAAGCAGC CGCTATCGAA
GCTCTTGATG GTGCTGAATG GATGGGACGT GACCTAAAAG TTAACAAAGC CAAGCCCAGA
GAAGACCGAG GTCCTTCTGG TGGTAATCGG GGAGGATACG GTGGAGGCGG TGGACGCAAC
CGCTACTAA
 
Protein sequence
MSIYVGNLSY EVTQDTLSAV FAEYGTVKRV QLPTDRETGQ PRGFGFVEMG SEAEEAAAIE 
ALDGAEWMGR DLKVNKAKPR EDRGPSGGNR GGYGGGGGRN RY