Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4642 |
Symbol | |
ID | 3679857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5805884 |
End bp | 5806192 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637719998 |
Product | RNA-binding region RNP-1 |
Protein accession | YP_325134 |
Protein GI | 75910838 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0167628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0600558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAATTT ATGTAGGCAA CCTCTCTTAC GAAGTTACCC AAGACACCTT AAGTGCCGTT TTTGCAGAAT ACGGTACTGT AAAGCGTGTT CAACTACCTA CTGACCGCGA AACAGGACAA CCACGGGGTT TTGGTTTTGT GGAAATGGGA AGTGAAGCTG AAGAAGCAGC CGCTATCGAA GCTCTTGATG GTGCTGAATG GATGGGACGT GACCTAAAAG TTAACAAAGC CAAGCCCAGA GAAGACCGAG GTCCTTCTGG TGGTAATCGG GGAGGATACG GTGGAGGCGG TGGACGCAAC CGCTACTAA
|
Protein sequence | MSIYVGNLSY EVTQDTLSAV FAEYGTVKRV QLPTDRETGQ PRGFGFVEMG SEAEEAAAIE ALDGAEWMGR DLKVNKAKPR EDRGPSGGNR GGYGGGGGRN RY
|
| |