Gene Ava_4635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4635 
Symbol 
ID3680004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5798296 
End bp5798985 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content41% 
IMG OID637719990 
Producturease accessory protein UreF 
Protein accessionYP_325127 
Protein GI75910831 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00483851 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.066113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAA TCACCCTCAC TGATCACCAT TTTTTACATA TCTTACAACT AGCTAGTTCT 
GCTTTACCTG TGGGAGCTTA TAGCTACTCG GAAGGATTAG AAACACTGGT AGAAAGTGGG
ACAATTACTA GTCAATCAAC TCTGCAACAA TGGTTAGAGG CTGAACTAAG TTATGGGGCG
ATTCGTCTAG AAGCTGCGGT GATGGTGAGA TCATATCAAG CTACCATAAT GGGTGAGATG
GAAACCTTAC GCTATTGGAA TCTGTGGTTA TCTGCGGCGA GGGAAACCCA AGAATTACGC
AATTCTAGCT GGCAAATGGG GCGATCGCTC ATGCAGTTAC TTGGTAAAAT ACAACCAGAA
ATTCTATCTT TAGCCAATAG TGTAGGTAAT CCTTGTAATT ATGCGATCGC TTTTGCAATT
GCCTCTGCAC ATTGGCAAGT AAATATTCAA GCCGCCTTAT TAGCATATCT GCATAGTTGG
GCAACTAATT TAATTACGGC TGGTGTCAAA CTCATCCCCC TTGGACAAAC AGCAGGACAA
GAATTACTAC TTCAGTTGCA ACCGTTAATT AGTCATGCAA CAGTAGAAAT TATGTCTTTA
AAAGATGATG AACTCAGTTG TTGTAGTTGG GGTTTATCTT TAGCCAGTAT GCAGCACGAA
ACGCAATATA CAAGGTTGTT TAGGAGTTGA
 
Protein sequence
MDTITLTDHH FLHILQLASS ALPVGAYSYS EGLETLVESG TITSQSTLQQ WLEAELSYGA 
IRLEAAVMVR SYQATIMGEM ETLRYWNLWL SAARETQELR NSSWQMGRSL MQLLGKIQPE
ILSLANSVGN PCNYAIAFAI ASAHWQVNIQ AALLAYLHSW ATNLITAGVK LIPLGQTAGQ
ELLLQLQPLI SHATVEIMSL KDDELSCCSW GLSLASMQHE TQYTRLFRS