Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4635 |
Symbol | |
ID | 3680004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5798296 |
End bp | 5798985 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637719990 |
Product | urease accessory protein UreF |
Protein accession | YP_325127 |
Protein GI | 75910831 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00483851 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.066113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAA TCACCCTCAC TGATCACCAT TTTTTACATA TCTTACAACT AGCTAGTTCT GCTTTACCTG TGGGAGCTTA TAGCTACTCG GAAGGATTAG AAACACTGGT AGAAAGTGGG ACAATTACTA GTCAATCAAC TCTGCAACAA TGGTTAGAGG CTGAACTAAG TTATGGGGCG ATTCGTCTAG AAGCTGCGGT GATGGTGAGA TCATATCAAG CTACCATAAT GGGTGAGATG GAAACCTTAC GCTATTGGAA TCTGTGGTTA TCTGCGGCGA GGGAAACCCA AGAATTACGC AATTCTAGCT GGCAAATGGG GCGATCGCTC ATGCAGTTAC TTGGTAAAAT ACAACCAGAA ATTCTATCTT TAGCCAATAG TGTAGGTAAT CCTTGTAATT ATGCGATCGC TTTTGCAATT GCCTCTGCAC ATTGGCAAGT AAATATTCAA GCCGCCTTAT TAGCATATCT GCATAGTTGG GCAACTAATT TAATTACGGC TGGTGTCAAA CTCATCCCCC TTGGACAAAC AGCAGGACAA GAATTACTAC TTCAGTTGCA ACCGTTAATT AGTCATGCAA CAGTAGAAAT TATGTCTTTA AAAGATGATG AACTCAGTTG TTGTAGTTGG GGTTTATCTT TAGCCAGTAT GCAGCACGAA ACGCAATATA CAAGGTTGTT TAGGAGTTGA
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Protein sequence | MDTITLTDHH FLHILQLASS ALPVGAYSYS EGLETLVESG TITSQSTLQQ WLEAELSYGA IRLEAAVMVR SYQATIMGEM ETLRYWNLWL SAARETQELR NSSWQMGRSL MQLLGKIQPE ILSLANSVGN PCNYAIAFAI ASAHWQVNIQ AALLAYLHSW ATNLITAGVK LIPLGQTAGQ ELLLQLQPLI SHATVEIMSL KDDELSCCSW GLSLASMQHE TQYTRLFRS
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