Gene Ava_4553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4553 
Symbol 
ID3680118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5705131 
End bp5705916 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content41% 
IMG OID637719909 
Productmethyltransferase 
Protein accessionYP_325046 
Protein GI75910750 
COG category[R] General function prediction only 
COG ID[COG2520] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.749759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA CAACCCTCAA TTTCCAAAAC GCTTCTGGAC ACGAAGTTCT CGCAGCAGTC 
GGTAAAAAAT ATCTGCGTCC CGGTGGACGA ATAGCTACAG AACAATTATG CCGGTGGGCG
AATTTCCAGC CTAGCGAAAC AGTTTTAGAG TTAGCTTCTA GCTTTGGATA CAGTGCAATA
TCCCTTGCTC AACGCTATGG TGTGAAAGTA GTCGGGGTAG AAAAAAATCC TGATAGCGTA
GTTCGTGCGC GTGAAAATGT CCGCGTGGCT GGTTTAGAAA ATCAAATTGA AATTATCGAA
GGCGATATTT TCCATCTGGA TGTAATACCA GGAAAGTTTG ATTATGTTTT AGCCGAAGCC
ATTCTCACAA TGCAATCCCC ATTAGGGAAA GCCAAGCTGT TAGCGGAAAT TCACAATCGA
CTCAAACCGG GGGGTAAGTT TCTCTCCCAT GAATTATTAG CTAATGACAA AGAAGAACAA
ATTCGTGCTG ATTTAGCAAG AGTAATTCGA GTAAATTCTA CACCACTTTC AGAGACTAAC
TGGATTGCAG CTTGTGAAAC AGCAGGATTA AAAGTAGAGA AACATCAAAT CGGCTCGATG
AATTTATTGA ACTTATGGCG GATGTTCCAA GATGAAGGTA TTTTCAACAC GATACAGATT
TTAGTTAATA TCTTGACGCA TAAATCTATC CGTGAAAGAG TTTTAGCAAT GCGTCACATC
TTTAACAAAT ACCGCCACGA ATTAGGCTAT ATCATTCTCT GTGCTGTAGC TCAAGAGGAT
AATTGA
 
Protein sequence
MTNTTLNFQN ASGHEVLAAV GKKYLRPGGR IATEQLCRWA NFQPSETVLE LASSFGYSAI 
SLAQRYGVKV VGVEKNPDSV VRARENVRVA GLENQIEIIE GDIFHLDVIP GKFDYVLAEA
ILTMQSPLGK AKLLAEIHNR LKPGGKFLSH ELLANDKEEQ IRADLARVIR VNSTPLSETN
WIAACETAGL KVEKHQIGSM NLLNLWRMFQ DEGIFNTIQI LVNILTHKSI RERVLAMRHI
FNKYRHELGY IILCAVAQED N