| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4543 |
|---|
| Symbol | |
|---|
| ID | 3680147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5696374 |
|---|
| End bp | 5697207 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637719899 |
|---|
| Product | nitrate transport ATP-binding subunits C and D |
|---|
| Protein accession | YP_325036 |
|---|
| Protein GI | 75910740 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAA TCAATAGAAA TAATCAAACC AACCCAAAAC CCCAAAAAAC AGATAACTTC
CTAGTAGTTG AAGGCGTAAG CAAAATTTAC CCCACCCCCG AAGGCCCCTA CACCGTCCTC
GATGGAATTG ACCTAAAAGT CCGTGAAGGC GAATTTGTCT GCCTAATCGG TCATTCCGGC
TGCGGTAAAT CAACCCTACT CAACATGATT TCCGGCTTCA ACACCCCCAG CGAAGGCGTA
GTTCTCCTAC AAGACAAACC CATCACCGAA CCAGGCCCCG ACCGGATGAT GGTCTTTCAA
AATTATTGCT TACTCCCTTG GTTGAGTGTT TTTGAAAACG TTTACCTAGC CGTAGATGCA
GTATTTCCCC ACAAACCCCA AGCCGAAAAA CGCGCCATCG TCAGAGAACA TTTAGCAATG
GTGGGGCTGA CAGAAGCCGC AGAGAAGAAG CCTAGCCAAA TTTCCGGCGG GATGAAACAA
CGAGTGGCGA TCGCTCGCGC TTTATCCATC CGCCCCCAAG TATTGATTCT CGATGAACCT
TTCGGCGCAT TAGACGCAAT CACCAAAGAA GAATTACAAG AAGAACTACT ACAAATTTGG
AGTGATCATC AAGTCACCGT CCTGATGATT ACCCATGACA TTGATGAAGC TTTATTCCTA
GCTGACAGAG TTGTGATGAT GACCAACGGC CCAGCAGCCC AAATCGGCGA AATCCTCGAT
ATTCCCTTCG ATCGCCCCCG CAACCGTCGC CGCATCATGG AAGACCCCGA ATATTACAAC
CTCAGAAATT ACGCCCTAGA TTTCTTATAT AACCGCTTTG CTCATGAGGA GTAG
|
|---|
| Protein sequence | MQIINRNNQT NPKPQKTDNF LVVEGVSKIY PTPEGPYTVL DGIDLKVREG EFVCLIGHSG
CGKSTLLNMI SGFNTPSEGV VLLQDKPITE PGPDRMMVFQ NYCLLPWLSV FENVYLAVDA
VFPHKPQAEK RAIVREHLAM VGLTEAAEKK PSQISGGMKQ RVAIARALSI RPQVLILDEP
FGALDAITKE ELQEELLQIW SDHQVTVLMI THDIDEALFL ADRVVMMTNG PAAQIGEILD
IPFDRPRNRR RIMEDPEYYN LRNYALDFLY NRFAHEE
|
|---|
| |