Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4541 |
Symbol | |
ID | 3680145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5693253 |
End bp | 5694092 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637719897 |
Product | nitrate transport permease |
Protein accession | YP_325034 |
Protein GI | 75910738 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGCTA TTTTAGGGAA TCGCGCTAGG GTAAGGAAAT CTCAAAAAGC CATCAATAAT TTCTTGTGGA AAAAAGTTGT ACCACCATTA GTAGCATTAG GAATTTTTCT GGTAATTTGG CAACTGCTTT GTTTGAATCC TAACTTTAAA TTACCAGGGC CTATAGAAAC CTTTTCGGAA ACTTGGGACC CTTTTATTAT CAATCCATTT TTTGATAACG GTGAAAGCGA TAAAGGCTTA GGCTGGCAAA TTCTGAGTAG TTTGGGAAGG GTTGGTTTAG GTTTTTCTTT GGCGGCGATC GCCGGAATTA TATTAGGCAT TTTAATCGGT GTAAATCCCT TAGTTTACAA TGCTGTAGAT CCTATATTTC AAGTGTTGCG AACTGTACCG CCCCTAGCAT GGCTACCCAT TTCACTGGCA GCATTTCAAC AGGCGAATCC CTCAGCAATT TTCGTTATTT TCATCACCTC AATTTGGCCG ATTTTGATTA ACACTACAGT CGGTGTACAA CAAATTCCCC AGGATTATAT CAATGTAGCG AAAGTGTTAC GGCTGAAGGG GGTAAAGTAC TTTTTTAAGA TAGTGTTTCC TGCGACGGTT CCATATATCT TTACAGGATT AAGGATTGGT ATCGGTTTAT CTTGGTTAGC AATTGTGGCG GCGGAAATGT TAGTTGGTGG TGTGGGGATT GGTTCGTTTA TTTGGGATGC CTATAACACA ACTACTGAAA CTAATTTGAG TGAGATTATT TTGGCATTAA TTTATGTTGG GTTGGTGGGG TTGTTGTTAG ATAGATTGGT CGGTTTTGTT GCTAGTAAAG TTGTGGCGGA GCAGAAGTAG
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Protein sequence | MTAILGNRAR VRKSQKAINN FLWKKVVPPL VALGIFLVIW QLLCLNPNFK LPGPIETFSE TWDPFIINPF FDNGESDKGL GWQILSSLGR VGLGFSLAAI AGIILGILIG VNPLVYNAVD PIFQVLRTVP PLAWLPISLA AFQQANPSAI FVIFITSIWP ILINTTVGVQ QIPQDYINVA KVLRLKGVKY FFKIVFPATV PYIFTGLRIG IGLSWLAIVA AEMLVGGVGI GSFIWDAYNT TTETNLSEII LALIYVGLVG LLLDRLVGFV ASKVVAEQK
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