| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4432 |
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| Symbol | |
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| ID | 3680424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5549704 |
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| End bp | 5552712 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719785 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_324925 |
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| Protein GI | 75910629 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGCC AACTTGATCA ATGTAATCGC CTCCTTTGGG AAAAATGTCC TGTTGGTCTA
GTATTGTGGC GAAAAAATGG CGCATTGATA GATGTTAATC CCACTTATGC CACCATTTTG
GGGAGAACTG TCCCAGAAAC CCTCAACTTA AACTACTGGC AGATTACTCC TGAAAACTAT
CTCGCTTCGG AGCGAACCAT ACTAGAGCAA CTAGAACAGA CCGGTTGTCA CCAAGCCTAT
GAGCAAGAGT ATCTGCACAA GGATGGACAC TTAGTTCCGG TGAAAGTTTC CACTGTGATG
ATTGAGAAAG ATGGCGAGAA GCTGATGTGG TCGAGTGTAG AAGACATTAG CAACATCAGA
CAAACCCAAA AAGAACGTCA ACAATCAGAA AAAATCTTGA AACAGAGCGA AGCACGATAC
CGCTCTCTGG TGACAACTAA TACACAAATT ATTTGGGTCA GTTCACCAGA AGGAATTTGC
TTTGAACTCA AAGACTGGAT CGCTTACACA GGACAAACTT TAGCGGAAGC TGAGAACGGA
GGGTGGATTG ATGCTGTTCA TCCCGATGAT CGGGGCTACA CCGGGGAAGC CTGGGGTATT
GCTGTAGCCA ACCGTAGTCA ATACCAAATT GAATACCGGA TTCGTGGCAA GGATGGCAAT
TATCGCTACT TTTGGGTCTG GGGCGCTCCT GTTATTGAAG AAGATGGCAA TGTCCGGGAG
TGGATTGGCA CCTGTACAGA TATTCACGAT CGCAAGTTAG CCGAAGCCGA AAATCAACGT
CTGAAGGAAC GATATCGCTC TTTGGTAACT GCTAGTTCCC AAATTGTTTG GGGAACAACC
CCAGAAGGAT GGGGAATCAG TAGCGAAATG CTCACTTGGA TAGCTTATAC AGGGCAGAAT
GAAGCGGAGG TTGAGGGTTG GGGTTGGCTT GATCCCATTC ACCCCGATGA CCGTACCCGT
TCCTTAGAAG CCTGGAATGC GGCTGTAGCG AACCGGAGTA TTTACCAAAC CGAATATCAG
CTACGTGGCA AAGATGGCAC TTACCGCTAC TTCTCGGTTT GTGGTGTCCC TGTCTTAAAA
CAAGATGGCA GTATTCAAGA ATGGATTGGC ACCTGTACCG ATATTCATGA CCGCAAGCTG
GCAGAAATGG CTCTAAGGCA ACTCAATCAG CAACTGGAAG CCAGAGTAGC AGAACGGACG
GCGGCACTGC AAAATACCCT AGCTGAAGCC CAAGGATTAA ATGCCATTTT AGATAACTTG
GCAGATGGTT TGTTGGTAGT GGACACCACA GGACAAATTA CCCATTACAA TCCTGCGTTT
TTAGCTATGC ACGGATTAAC AGCCAATACC CTGAATGGAC ATTATCAGGA ACTACCTATA
TTCGGTTTAG CAGATTTGAT TGAACATACT CGATCCCATC CTGGAGAGGT GTTTACTGCT
GATGTAGCAC TGGCGAAAGA CCGCATTGGG CAAGCCGTAG GGACAGCCAT CTTTAAGCGG
ACAGACACCC AGGAAGTTGC CGCTTGCTTT GGTTCAGCGC TGTTGATTCG GGATGTAACG
GCGGAAAAAG AAATCGACAA AATGAAAACT GATTTTATCT CCACAGTTTC CCACGAACTC
AGAACACCAC TAACTTCTGT CCTTGGTTTT GCCTCCATCA TTCAAGAAAA ACTGCAAAAA
GATGTATTCC CCATCCTGTC CACCGAAGAT CGTAAACTGC AAAAAACCAT CAAGCGGGTG
GGTGACAATC TCAATATTAT TGTGTCGGAA GCAGAACGAC TCACATCTTT GATTAACGAT
GTTTTAGACA TTGCCAAGAT GGAAGCAGGT AAGGTGGAAT GGCAAATGCA GCCCATCGAC
CCTGGTGAGT TATTGGATTG GGCGACTACT TCCACAGCCG CATTATTTGA AACTAATGGT
CTACAGTTGC TCACAGAAAT TGAATCTGGA TTGCCGCAAA TCATAGGCGA TCGCAATCGT
CTATTACAAG TCCTGATCAA TTTAATTTCT AATGCCGTTA AGTTTACTGA ATTTGGCTCT
GTTACCTGTC GCGTCAAACA AGACAAAGAT GGTGTATGTA TCAGTGTCAT TGATACAGGT
GTTGGTATTG CCCCAGAAGA CCAGCCTAAA GTATTTGAGA AATTCCGCCA AGTTGGTGAT
ACCCTTACCG ACAAACCCAA AGGTACAGGG TTAGGACTAC CCATCTGTAA ACAAATTGTC
GAACATCATG GTGGCAGAAT CTGGGTGGAA AGTGAACCAG GTCATGGTAG CGTCTTCTCT
TTCCACATTC CCATCTACGC TAGCAATCAC AACACCAATG CTAATCTCAA TCTCGATGCC
TTAGTCAGAC AACTGAAAGA ACACGTCATC ACTGCCAACC AAGTATGCAG CGAAAACCGC
AAAACCATTC TTGTTGTCGA TGATGATGCC AATATTCGAG AACTACTCCG TCAACAACTA
GAAAATGAAG GCTACAACGT TCGGGAAGCC AAAGATGGTA TGGATGCGAT TCATCAAATC
AAAATATCCT CCCCTGATTT GATTGTTCTG GATGTGATGA TGCCCCAAAT TAACGGTTTT
GATGTAGCGG CTGTTTTGAA AAACGATCCC CTAACCGCAG ACATTCCAAT CATCATTCTC
TCAATTGTGG AAAATAAAGA ACGCGGTCAC CACATTGGGA TTGATCGCTA TCTCACCAAG
CCTATCAATA CAGAAGAACT TCTCAATGAA ATTGGCTCGC TCCTTTCCCA GGGTATTTCT
AGTAAGAAGG TTTTGGTTGT TGATCAAAAC GCGTCAACTT TAAAAACTAT ATCGGATGTC
TTGCAAACTC AGGGATACAA CGTGATTGAA GCCTCAGATC CCCAAGAATG TATCCGTAAA
GCCCTGTCAG CTAAACCGGA CATGATCATC ATCGATTCTA TCTTCTCTCA AGAAGCCGAC
TTAGTGAAAA CTCTCAAATT TGAAAAGGAG TTAGAGAATG TATTCTTCAT CATGCTCTCA
GACCGCTAA
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| Protein sequence | MSSQLDQCNR LLWEKCPVGL VLWRKNGALI DVNPTYATIL GRTVPETLNL NYWQITPENY
LASERTILEQ LEQTGCHQAY EQEYLHKDGH LVPVKVSTVM IEKDGEKLMW SSVEDISNIR
QTQKERQQSE KILKQSEARY RSLVTTNTQI IWVSSPEGIC FELKDWIAYT GQTLAEAENG
GWIDAVHPDD RGYTGEAWGI AVANRSQYQI EYRIRGKDGN YRYFWVWGAP VIEEDGNVRE
WIGTCTDIHD RKLAEAENQR LKERYRSLVT ASSQIVWGTT PEGWGISSEM LTWIAYTGQN
EAEVEGWGWL DPIHPDDRTR SLEAWNAAVA NRSIYQTEYQ LRGKDGTYRY FSVCGVPVLK
QDGSIQEWIG TCTDIHDRKL AEMALRQLNQ QLEARVAERT AALQNTLAEA QGLNAILDNL
ADGLLVVDTT GQITHYNPAF LAMHGLTANT LNGHYQELPI FGLADLIEHT RSHPGEVFTA
DVALAKDRIG QAVGTAIFKR TDTQEVAACF GSALLIRDVT AEKEIDKMKT DFISTVSHEL
RTPLTSVLGF ASIIQEKLQK DVFPILSTED RKLQKTIKRV GDNLNIIVSE AERLTSLIND
VLDIAKMEAG KVEWQMQPID PGELLDWATT STAALFETNG LQLLTEIESG LPQIIGDRNR
LLQVLINLIS NAVKFTEFGS VTCRVKQDKD GVCISVIDTG VGIAPEDQPK VFEKFRQVGD
TLTDKPKGTG LGLPICKQIV EHHGGRIWVE SEPGHGSVFS FHIPIYASNH NTNANLNLDA
LVRQLKEHVI TANQVCSENR KTILVVDDDA NIRELLRQQL ENEGYNVREA KDGMDAIHQI
KISSPDLIVL DVMMPQINGF DVAAVLKNDP LTADIPIIIL SIVENKERGH HIGIDRYLTK
PINTEELLNE IGSLLSQGIS SKKVLVVDQN ASTLKTISDV LQTQGYNVIE ASDPQECIRK
ALSAKPDMII IDSIFSQEAD LVKTLKFEKE LENVFFIMLS DR
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