Gene Ava_4405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4405 
Symbol 
ID3680532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5524014 
End bp5524502 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID637719758 
Producthypothetical protein 
Protein accessionYP_324898 
Protein GI75910602 
COG category[S] Function unknown 
COG ID[COG5500] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.14034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG TTGACAACTC GTTTTTCATA CTGAAGCTTT TTGCAATACT AGGCTGCGGG 
CTGATGGCTG GAGTCTTCTT CGCTTTCTCC ACCTTCGTCA TGAATGCTCT TGCCAGACTT
CAACCCACGC AGGGCATTGT CGCTATGCAG TCCATTAATA TTACAGTGAT TAACCCATTG
TTTATGACAG CGTTTCTGGG AACAGGCGTG GCGTGCATGA TTCTTTTAAT TTCTTTACTG
TTAAACAGGC ATCAACCCAG TGCTGTCTAT TTGCTTGCTG GTAGTCTACT CTATCTTTTT
GGTACATTCG GCGTGACCAT CATATTTAAT GTACCGCTAA ACAAAGCGCT GGCGATCGCC
AATCCAGATA GCACTGATGG GGTGAAACTT TGGACTAGCT ACCTGACTAA CTGGACATTC
TGGAACCACA TTCGCACAGC CGCAGCACTT GCAGCATCAG CATTGCTCAC CATCGCACTC
CGCTATTGA
 
Protein sequence
MATVDNSFFI LKLFAILGCG LMAGVFFAFS TFVMNALARL QPTQGIVAMQ SINITVINPL 
FMTAFLGTGV ACMILLISLL LNRHQPSAVY LLAGSLLYLF GTFGVTIIFN VPLNKALAIA
NPDSTDGVKL WTSYLTNWTF WNHIRTAAAL AASALLTIAL RY