Gene Ava_4370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4370 
Symbol 
ID3680614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5477260 
End bp5478846 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content43% 
IMG OID637719723 
Productpeptidase M16-like 
Protein accessionYP_324863 
Protein GI75910567 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.345763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAC TTAGTCGTTC AATATCGCGT CGGCTGTTGG CAACCTTGAT GGCAACAGTC 
GTTATATGGT GGGGATGGAC ACCAGAAATA GCTTTGGCAC AAACGCCTCC TGCTTTACAA
CCAAGCAAAA CACCAACTGC AAAGGTTCCC ACTTCAATTC AACCCTATCT AGACCGGGTA
ATTAAGGATT TGACGGAGTT CCGGCTGGAT AATGGTATGA AGTTTATTGT CTTAGAACGC
CATCAAGCGC CAGTGGTTTC CTTTCTCACC TACGCGGATG TTGGGGGTGT GGATGAACCT
GATGGTAAGA CTGGTGTCGC TCACTTTCTT GAGCATTTGG CGTTCAAAGG CACTACACGC
ATTGGTACAC AGAATTATCA GGCTGAAAAA CCCTTGCTTG AGCGGTTGGA GCAGTTAGAC
ACGCAAATTC GAGCCGCGAA AGCCAATGGT AAGCAAGATG ATGTTGCTAG GTTGCAAGCG
ACTTTTAAGG AAGTAGAATC ACAAGCTGGT AAATTAGTCA AACAAAATGA ACTGGGGCAA
ATTGTCGAAC AATCTGGGGG TGTAGGTTTA AACGCCAATA CCTCAACGGA AGCGACACGT
TATTTCTACA GTTTCCCGTC CAATAAGTTA GAACTGTGGA TGTCGTTGGA GTCTGATCGA
TTTCTTGATC CTGTGATTCG CCGGGAGTTT TATAAAGAAA AAGATGTGAT TTTAGAAGAG
CGGCGGATGC GGATCGAAAA TTCACCTATT GGTTTGATGG TGGAAAAGTT TATCGATGCT
GCTTACAAAG TTCATCCTTA CAGACGACCA GTGATTGGTT ATGACCAAGA TATTCGTAAC
TTAACGCCAG AAGATGTACA GACGTTTTAC AATACTCACT ACGTACCCAG TAATATTACC
ATTGCTGTTG TTGGGGATGT GAAAACGGCT GAGGTGAAAC AACTGGCGCA AACTTACTTT
GGACGCTACA AAGCAGCACC TAAACCACAG TCAAAAATTA CCCCAGAACC CAAACAAACA
CAAACAAGAG AGGTTACTTT AGAACTCGCT TCTCAACCTT GGTATTTAGA AGGTTATCAT
CGTCCCGCAG TGACTCATCC AGATAATGCG GCATACGATA TTATTGCCAG CTTGTTAAGT
AGTGGACGTA CGTCGCGGTT ATATAAGTCT TTGGTGGAAA AAGAACGTGT AGCATTAAAT
GCTCAAGGTT TTAGTGGTTT TCCTGGGGAT AAATACCCCA ATTTGATGCT GTTCTATGCT
CTCACTGCTC CTGGTCACAC AGTTGATGAA GTAGCAGTGT CTTTAAGCAA AGAAATTGAC
AAGTTGAAAA CTGAACCTGT ATCTGCGGTG GAATTAGAAC GGGTGAAAAC TCAAGCCAGG
GCTGGTTTAT TACGTAGCTT AGATTCCAAT ATGGGTATGG CGCAGCAACT TTTGGAATAT
GACGTAAAAA CAGGCTCTTG GCGCAATTTG TTTAAACAAT TAGATGAAAT TGTGGCTGTG
ACTCCTGCGG ATATTCAGCG AGTAGCCAAA GCAACGTTTA CGCCAGAAAA TCGCACAATT
GGCAAGTTGT TATCGAAAAA AGCATGA
 
Protein sequence
MNQLSRSISR RLLATLMATV VIWWGWTPEI ALAQTPPALQ PSKTPTAKVP TSIQPYLDRV 
IKDLTEFRLD NGMKFIVLER HQAPVVSFLT YADVGGVDEP DGKTGVAHFL EHLAFKGTTR
IGTQNYQAEK PLLERLEQLD TQIRAAKANG KQDDVARLQA TFKEVESQAG KLVKQNELGQ
IVEQSGGVGL NANTSTEATR YFYSFPSNKL ELWMSLESDR FLDPVIRREF YKEKDVILEE
RRMRIENSPI GLMVEKFIDA AYKVHPYRRP VIGYDQDIRN LTPEDVQTFY NTHYVPSNIT
IAVVGDVKTA EVKQLAQTYF GRYKAAPKPQ SKITPEPKQT QTREVTLELA SQPWYLEGYH
RPAVTHPDNA AYDIIASLLS SGRTSRLYKS LVEKERVALN AQGFSGFPGD KYPNLMLFYA
LTAPGHTVDE VAVSLSKEID KLKTEPVSAV ELERVKTQAR AGLLRSLDSN MGMAQQLLEY
DVKTGSWRNL FKQLDEIVAV TPADIQRVAK ATFTPENRTI GKLLSKKA