Gene Ava_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4348 
Symbol 
ID3680690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5454904 
End bp5457348 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content48% 
IMG OID637719701 
ProductUvrB/UvrC protein 
Protein accessionYP_324841 
Protein GI75910545 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC ACTTCACTTC CGAAGCCATC AAAGTTATTA TGCTCGCTCA GGAGGAAGCA 
CGTCGCCTGG GACACAATTT CGTAGGAACT GAGCAAATTC TCCTGGGTTT GATGGGAGAA
GGAACTGGGG TTGCTGCCAA AGTGCTGACT GAGATGGGTG TGACTCTCAA AGACGCTCGT
CGTGAGGTTG AAAAAATTAT TGGTAGGGGT TCTGGGTTTG TACCACCAGA AATTCCTTTT
ACCCCGAAAG TGAAAAGCCT CTTCGAGCAG TCCTTTAGAG AAGCTCATAA TCTCGGAAAT
AACTACATCA ACACAGAACA TTTACTCTTA GGGTTAACAG AAGCCGGTGA AGGTGTCGCC
GCTAAGGTTT TACAGAATCT TGGCGTTGAC CTCAAGAGTG TCCGCTCTGC TGTCATCCGT
CGCTTAGGCG AAGACCCAAC CGTGGTTGTG GGTGGTGGTG GTTCCAGACG GAACCAAACA
CCGACGATAG AAGAGTTTGG CAGAAATCTG ACGAAATTAG CTAAAGAAGG TAAACTCGAC
CCTGTAGTCG GTCGGCAAAA AGAAATTGAG CGTGCTGTGC AGATTCTCGG CCGTCGTACC
AAGAATAACC CCGTGTTAAT TGGTGAACCA GGGGTTGGTA AAACTGCGAT CGCTGAAGGT
TTAGCACAGC GTATTATTAA CCAAGATGTC CCCGACATTT TGCAAGATAA ACAAGTCATC
AGCCTGGATA TGGGTTCTCT GGTAGCGGGA ACTCGCTTCC GGGGAGACTT TGAAGAACGC
ATCAAGAAAA TCGTAGAAGA AGTCCGTTCT GCGGGTAATA TCATCCTGGT GATAGATGAA
ATTCATACCC TAGTTGGTGC AGGGGGAACA GAAGGCGGCT TAGATGCAGC CAATATTCTC
AAACCAGCCT TGGCCAGGGG TGAATTGCAA TGTATTGGCG CTACCACATT AGATGAATAT
CGTCAACACA TCGAACGCGA TGCAGCTTTA GAGCGACGTT TCCAACCGAT TATGGTCGGG
GAACCATCCG TAGCTGAAAC CATTGATATC CTCTACGGTT TGCGCGGAGC CTACGAACAG
CACCACAAAG TACATATTTC CGATGAAGCT GTGGTTGCAG CCGCGCAATT GGCTGATAGA
TATATTAGCG ATCGCTTCCT GCCCGATAAA GCCATAGACT TAATTGATGA AGCTGGCTCT
CGTGTGCGCC TGCGGAACTC GCAAATTTCC CCTAACAAGG AACTCAAGCG TCAACTGACT
GACATCACCA AAAGCAAAAA CGAAGCGGTG AGAGTCCAAG ACTTCGATAA AGCCGCAAAA
CTTCGTGACG AAGAAATTGC CCTAGAAACA GAACTGCAAG CAGCCACCAC TGGCCAAACC
ATCAAACCAG TTGTGGATGA AGAAGACATT GCCCAAATCG TCGCCTCTTG GACTGGTGTT
CCAGTCAACA AGCTGACAGA ATCCGAGTCT GAGTTGCTTC TGCACCTAGA AGATACTCTC
CACAAACGGT TAATTGGTCA AGAACAAGCA GTTACATCTG TTTCTCGCGC CATCCGTCGC
GCCAGAGTCG GCTTAAAGAG TCCCAACCGT CCCATTGCTA GCTTTATCTT CTCCGGGCCT
ACAGGAGTAG GGAAAACCGA ACTAGCCAAA GCATTAGCAG CTTACTTCTT CGGCGCGGAA
GATGCCATGA TTCGGCTTGA TATGTCCGAA TACATGGAAA GTCACACCGT TTCTAAACTC
ATCGGCTCGC CTCCTGGTTA CGTCGGCTAC GACGAAGGCG GACAACTCAC CGAAGCCGTG
CGGCGCAGAC CATACACAGT GTTGCTGTTC GACGAAATCG AAAAAGCGCA CCCCGATGTA
TTCAATATGC TGCTGCAAAT TTTAGATGAC GGACACATCA CCGATGCCAA AGGTCGGAAA
GTGGACTTCA AGAACACCTT GATTATCCTG ACTTCCAACA TAGGTTCTAA AGTGATTGAA
AAAGGTGGCG GCGGTTTAGG CTTTGAATTT GACAACCAAG CCGAAGCTAG TTACAACCGC
ATCCGTAACT TAGTTAACGA AGAACTGAAA AATTACTTCC GTCCTGAGTT CCTCAACCGA
CTTGATGAAG TCATCGTCTT CACTCAACTG TCGAGAGATG AAGTCAAGCA AATCGCTGAT
ATCATGCTGC GTGATGTCGC CAGTCGCCTG ACCGAGAAGG GAATTACCTT AGAAGTTACC
GAACGGTTCA AAGAATTAGT AGTAACAGAA GGTTACAACC CCAGCTACGG TGCTAGACCA
TTACGTCGTG CAATCATGCG CCTCCTAGAA GACTCTTTAG CAGAAGTGTT GCTATCTGGA
GAAATCACCG AGGGAGACAC AGCCATTGCT GATGTGAACG ATGATGGCCA AGTACAGATA
CACAAGTCAG AAGAAAGAGA GTTACTCTTG GCAAATGTTG GTTAA
 
Protein sequence
MFEHFTSEAI KVIMLAQEEA RRLGHNFVGT EQILLGLMGE GTGVAAKVLT EMGVTLKDAR 
REVEKIIGRG SGFVPPEIPF TPKVKSLFEQ SFREAHNLGN NYINTEHLLL GLTEAGEGVA
AKVLQNLGVD LKSVRSAVIR RLGEDPTVVV GGGGSRRNQT PTIEEFGRNL TKLAKEGKLD
PVVGRQKEIE RAVQILGRRT KNNPVLIGEP GVGKTAIAEG LAQRIINQDV PDILQDKQVI
SLDMGSLVAG TRFRGDFEER IKKIVEEVRS AGNIILVIDE IHTLVGAGGT EGGLDAANIL
KPALARGELQ CIGATTLDEY RQHIERDAAL ERRFQPIMVG EPSVAETIDI LYGLRGAYEQ
HHKVHISDEA VVAAAQLADR YISDRFLPDK AIDLIDEAGS RVRLRNSQIS PNKELKRQLT
DITKSKNEAV RVQDFDKAAK LRDEEIALET ELQAATTGQT IKPVVDEEDI AQIVASWTGV
PVNKLTESES ELLLHLEDTL HKRLIGQEQA VTSVSRAIRR ARVGLKSPNR PIASFIFSGP
TGVGKTELAK ALAAYFFGAE DAMIRLDMSE YMESHTVSKL IGSPPGYVGY DEGGQLTEAV
RRRPYTVLLF DEIEKAHPDV FNMLLQILDD GHITDAKGRK VDFKNTLIIL TSNIGSKVIE
KGGGGLGFEF DNQAEASYNR IRNLVNEELK NYFRPEFLNR LDEVIVFTQL SRDEVKQIAD
IMLRDVASRL TEKGITLEVT ERFKELVVTE GYNPSYGARP LRRAIMRLLE DSLAEVLLSG
EITEGDTAIA DVNDDGQVQI HKSEERELLL ANVG