| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4342 |
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| Symbol | |
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| ID | 3680684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5445393 |
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| End bp | 5447273 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719695 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_324835 |
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| Protein GI | 75910539 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.441734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT ACCAACTTTC CCAAAAATCT TATAAACAAA ACCGTTGGCG TAACAACGAC
TGGCGGCTGT TTTCACGTTT GGTTCCTTAC GCCCGGCGTA ATACTAAACT ACTGATTCTG
GCAATGGTAT TGCTATTACC ACTTGCTTTG GCTAATGCCG TACAGCCCTT GTTAATTGGA
CAAGCTGTAT CCTTAATTCG TAATGAATCT AGCGCATACG AGTTTTTGAG AAGTCGTCCA
TTGTCTCAAG GGCTACATAT TATTGAAGGA ATATTACTCT TTACAATTGT TATCCGTTTA
GCGTTGACGG GTTACCAAGG CTATTTGTTA CAGAAATTAG GACAAAAAAT CACAGCCGCT
ATTCGCCAAG ACTTATTTCA TCATGTAACA TCTCTGGCGG TACGTTTCTT CGACCGTACA
CCCGTTGGTA AACTCATTAC CCGGCTCACC AGCGATGTGG AAGTATTGGG AGACGTATTT
TCCACTGGCG CTATTGGCAT TGTCTCTGAC GTAGTTTTGA TGGTGGTAAT TACTGGTTTA
ATGTTTTCTA TCCAGTGGCA ACTTGCTTCC TTGCTCCTGG TGATGTTGTT ACCAGTTACT
TGGTTAATTA TTTACTTCCA ACAAGAGTAC CGCAAAGCTA ATTACAAAGC TAGGGAAGAG
CTATCTTTAC TGAATTCCCA ACTACAAGAG AATGTTCTGG GGATTAACGT AGTCCAGTTA
TTCCGGCGGG AAAGCTTTAA TGCTGAGTTA TTTCGCACTA CAAACCAACG CTATACCAAA
CAGGTGGATC AAACTATCTT TTTTGATTCG GCTGTTTCCG CAACTCTGGA ATGGATTGGC
TTAATTGCGA TCGCTGGTGT ATTGTGGGTG GGTGGCTGGT TGCTTTCAGA AAATCAACTT
GATTTTGGGA CTTTATCGAC CTTTATTTTA TACGCCCAGC GCTTATTCGA CCCTTTACGA
GATTTTGCGG AAAAATTCAC AGTCATTCAA TCTGGATTTA CGGCTATTGA ACGGGTTAGC
GATATTTTAG ATGAACCGAT AGAAATAAGC GATCGCTCCA ACTCTCGATT TTCCGTCTTT
GATGCTAAAT TCGGTTACAT TGATGAAATT GTCGCTGATT TAGAATCTCA AAATATCAGC
GACACTCCAA ACATGGGAGA AATCCGTTTT GAACACGTTT GGTTTGCCTA TAAAGACGAC
GATTACGTCA TTAAAGACTT AGACTTTATC ATTCGTCCTG GCGAAAAAGT TGCATTAGTA
GGGCCTACTG GCGCAGGTAA AAGTTCTATC ATCCGTCTTT TATGTCGTCT TTACGAACCC
ACCCAAGGAC GCATCTTAGT AGATGGAATT GATATCCGTG AGTTACCTCA AGCAGAATTA
CGCCGTTATA TGGCGGTTAT TCTACAAGAG GGTTTTTTGT TTGCTGGTAA TGTCAAAAGT
AACATTACTT TAGGTGATTA CTATACTTTT GAGGAAATTC AAGCAGCTGC ACAGCAAACA
AATATTGCTG AATTTATTGA AGAACTACCC TTAGGTTACG ATACTAAATT GCGAGAACGG
GGTACAAACC TTTCCAGTGG ACAAAAGCAA CTGTTAGCTT TTGCTCGTGC TGCAATTCGC
AATCCTCAAA TTTTAGTTTT AGATGAAGCC ACCGCGAGTC TCGATGTTGG CACAGAAGCG
TTAGTCCAGG AAGCATTAAA CGAATTATTA ATCGGACGAA CTGCAATCAT TATTGCTCAC
CGCCTGTCTA CAATTCGCAA CGTAGATAGA ATTTTTGTGT TGAAGCGTGG TGAATTAGTG
GAACAAGGTA GCCATGAGGA ACTGTTAAAT TCAGGAGGGC TTTATTCTAC TCTGCATAAT
CTACAAATGC TGGGAACCTA G
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| Protein sequence | MSIYQLSQKS YKQNRWRNND WRLFSRLVPY ARRNTKLLIL AMVLLLPLAL ANAVQPLLIG
QAVSLIRNES SAYEFLRSRP LSQGLHIIEG ILLFTIVIRL ALTGYQGYLL QKLGQKITAA
IRQDLFHHVT SLAVRFFDRT PVGKLITRLT SDVEVLGDVF STGAIGIVSD VVLMVVITGL
MFSIQWQLAS LLLVMLLPVT WLIIYFQQEY RKANYKAREE LSLLNSQLQE NVLGINVVQL
FRRESFNAEL FRTTNQRYTK QVDQTIFFDS AVSATLEWIG LIAIAGVLWV GGWLLSENQL
DFGTLSTFIL YAQRLFDPLR DFAEKFTVIQ SGFTAIERVS DILDEPIEIS DRSNSRFSVF
DAKFGYIDEI VADLESQNIS DTPNMGEIRF EHVWFAYKDD DYVIKDLDFI IRPGEKVALV
GPTGAGKSSI IRLLCRLYEP TQGRILVDGI DIRELPQAEL RRYMAVILQE GFLFAGNVKS
NITLGDYYTF EEIQAAAQQT NIAEFIEELP LGYDTKLRER GTNLSSGQKQ LLAFARAAIR
NPQILVLDEA TASLDVGTEA LVQEALNELL IGRTAIIIAH RLSTIRNVDR IFVLKRGELV
EQGSHEELLN SGGLYSTLHN LQMLGT
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