Gene Ava_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4300 
Symbol 
ID3680812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand+ 
Start bp5389169 
End bp5389783 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content42% 
IMG OID637719649 
Productcytochrome c oxidase subunit III 
Protein accessionYP_324794 
Protein GI75910498 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000000246716 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCT ATATTGTTTC AGATGAGTCG CAGGAACCCC AACATCATGC AGGTGGTGAA 
CACAGTCATG ATGAAGAAGG CAATAAAATG TTCGGCTTTA TTGTCTTTTT ACTATCTGAA 
AGTGTCATTT TCTTAAGCTT TTTCGCTGGA TATATCGTCT ACAAAACAAC TACTCCTAAC 
TGGCTACCTG TTGGCGTGGA AGGGTTAGAA GTTAAAGACC CGGCAATTAA TACAGTGGTG 
TTAGTTGCTA GTAGTTTTGT GATTTATTTT GCGGAACTTG CCCTAAAACG CAAAAACTTG 
CGGTTATTTC GCATCTTTTT GTCAGCAACA ATGGCGATGG GTAGCTACTT TTTGGTAGGA 
CAAGCCATTG AATGGAGTCA CTTAGAGTTT GGCTTTACCT CCGGCGTATA CGGAGGAATG 
TTCTACCTGT TAACAGGGTT CCACGGTTTG CACGTTTTTA CAGGGATCTT GTTACAGTTT 
ATTATTCTTG TGCGATCGCT CATTCCTGGT AACTACGATA CAGGTCACTT CGGCGTAAAT 
GCCACTTCTT TGTTTTGGCA CTTCGTCGAT GTCATCTGGA TTATTTTGTT TATCCTCATC 
TACATCTGGC AGTAG
 
Protein sequence
MDSYIVSDES QEPQHHAGGE HSHDEEGNKM FGFIVFLLSE SVIFLSFFAG YIVYKTTTPN 
WLPVGVEGLE VKDPAINTVV LVASSFVIYF AELALKRKNL RLFRIFLSAT MAMGSYFLVG 
QAIEWSHLEF GFTSGVYGGM FYLLTGFHGL HVFTGILLQF IILVRSLIPG NYDTGHFGVN 
ATSLFWHFVD VIWIILFILI YIWQ