Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4287 |
Symbol | |
ID | 3680838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5372844 |
End bp | 5373920 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637719636 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_324781 |
Protein GI | 75910485 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTATCAC AAACTTACAA ATTATTATTT GTGTCCACTC CCATTGGTGC TTTAGGCACA GGATTAGGAG GCGGAGTAGA ACTTACTTTA TTTAATATTG CACAAGAGTT TTTGCGGCGA GGACACAAAT TAGAAATAGT AGCACCACAG GGTTCTGCTA TTAGTTCATT ACCCATTAAA GAAATTCCAG GGGAACTACA ATTATCAGCC CAAAATCAAA ATCGTACCGA CCCAATTTTT GTCCCGACTA ACTCTGTTTT GGCAAATATG TGGGACTATG CTCGTCAAGT GCAAACAGAC TATGATTTGA TAGTGAATTT TTCTTATGAT TGGTTACCAT TATATTTAAC ACCATTTTTT CATCGTCCCA TCGCCCATCT CATCAGCATG GGTTCCTTAA CAGATGTGAT GGACGACATG ATTGAAAAGG TCGCCAATAA TTTTCCAGGT ACAATTGGTG TCCACGGCAA AACACAAGCC GCTACTTTTA CATTTGCCGA AAAATGCCAT TGTCTGTTAA ATGGGCTAGA TATATCAGCT TATACGTTTT GTGGTGAACC AAGTTCTTCC TTAGCATGGG TGGGGAGAAT TGCACCAGAA AAAGGTCTAG AAGATGCAGT CGCAGCCGCG AACATCACCG GAATTCCCCT GAAAATCTTC GGTTTGAAAC AGAATGAGGC TTACTGGGAG CAGATTTGTC AAGCATACCC TGACGCACCT ATAGAATATG TGGGCTTTTT ATCCACCCAT GAACTACAAC ACCAATTAGG TCAGTGTCGA GCAGTCTTTA TCACTCCCCG ATGGGTTGAG GCTTATCCCA ACGTAGCACT TGAGGCGCTG GCCTGTGGAG TACCCCTGAT AGCCTATAGT CGGGGTGGTT TAACAGAAAT TGTCCAAGAC GGCAAAACAG GCTTTTTGGT AGAACCGGAT AGTGTGGAAG GCTTGGTAGA AGCCATTCAT CGCCTAAATG AAATCGACCG TCGCGCCTGT CGCCAGCAAG CCGAAACTCA ATATTCTTCT CAAGCTATGG GCGATCGCAT GGAACAATGG TTTAAGAACA TCCTGATGAA ACTTTAA
|
Protein sequence | MVSQTYKLLF VSTPIGALGT GLGGGVELTL FNIAQEFLRR GHKLEIVAPQ GSAISSLPIK EIPGELQLSA QNQNRTDPIF VPTNSVLANM WDYARQVQTD YDLIVNFSYD WLPLYLTPFF HRPIAHLISM GSLTDVMDDM IEKVANNFPG TIGVHGKTQA ATFTFAEKCH CLLNGLDISA YTFCGEPSSS LAWVGRIAPE KGLEDAVAAA NITGIPLKIF GLKQNEAYWE QICQAYPDAP IEYVGFLSTH ELQHQLGQCR AVFITPRWVE AYPNVALEAL ACGVPLIAYS RGGLTEIVQD GKTGFLVEPD SVEGLVEAIH RLNEIDRRAC RQQAETQYSS QAMGDRMEQW FKNILMKL
|
| |