Gene Ava_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4271 
Symbol 
ID3680880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5354023 
End bp5354820 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content39% 
IMG OID637719619 
Producthypothetical protein 
Protein accessionYP_324765 
Protein GI75910469 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.740344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.157539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACTG ATACCATCTT CTACAGCCTA TTTCAAGCAT TTCCCAACAT CTTCTTTGAA 
CTGATTAACC AGTCTCCACA AGAAGCAAGT ATCTACGAAT TTACCTCGCG CGAAGTTAAA
CAATTGGCTT TTCGTCTGGA TGGCTTATTT TTACCAAAAA TTAACGACTC CACCAAACCA
TTTTATATAG TTGAAGTCCA GTTTCAACCA GATGATGATT TTTACTACCG TTTGTTTGCA
GAACTATTCC TCTACTTAAA ACAATACAAA CCTCCCTATC CTTGGCAAGT GGTGGTAATT
TATCCTAGTC GTGGCATCGA AAGACAGCAG ACTATACATT TTGATGAAAT TCTTGTACTC
AACAGAGTCA AACGCATTTA CTTAGATGAG CTAGGAGAAG TAGCAGAAAC TTCCTTGGGC
GTTGGAGTTG TTAAGCTAGT AATTGAAACT GAAGACACTG CACCAGTATT AGCAAGACAG
TTGATAGCAC AAGCAAAGCA GCAGCTAACG GATGTAACCG CTAAACGTGA CCTCATCAAC
TTAATTGAGA CAATCATCGT CTACAAATTA CCGCAAAAAA GTCGCGAGGA GATAGAAGCT
ATGTTGGGTT TAAACGAACT GAAACAAAGC CGAGTTTATC AAGAAGCTTT AGAAGAAGGG
AAACAGGAAG GGAAACAGGA AGCTAAATTA GAAACGATAC CTCGTATGGT ACAGTTTGGT
TTGAGTGTAG AAGCGATCGC TCAATTATTA GATTTACCAC TAGAAGTTGT CCAGCAAGCA
GTACAACCAA TAAGCTGA
 
Protein sequence
MKTDTIFYSL FQAFPNIFFE LINQSPQEAS IYEFTSREVK QLAFRLDGLF LPKINDSTKP 
FYIVEVQFQP DDDFYYRLFA ELFLYLKQYK PPYPWQVVVI YPSRGIERQQ TIHFDEILVL
NRVKRIYLDE LGEVAETSLG VGVVKLVIET EDTAPVLARQ LIAQAKQQLT DVTAKRDLIN
LIETIIVYKL PQKSREEIEA MLGLNELKQS RVYQEALEEG KQEGKQEAKL ETIPRMVQFG
LSVEAIAQLL DLPLEVVQQA VQPIS