Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4246 |
Symbol | |
ID | 3680894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5325795 |
End bp | 5326724 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637719594 |
Product | Fe-S cluster assembly protein NifU |
Protein accession | YP_324740 |
Protein GI | 75910444 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0694] Thioredoxin-like proteins and domains [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.451507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGAAT ATACAGAGAA GGTATTAGAG CTTTTTTACA ATCCCAAAAA CCAAGGTGCG ATCGCAGATA GTAACGAAGC AGGTGTGGCA GTGGTTTTTG GTGAGGTGGG TAGTATTGCC TGCGGAGATG CTTTGAGACT GCACCTGAAG ATAGAAGTAG ACACTGATAA AATTCTGGAT GCTCGTTTTC AGACCTTTGG TTGTACCAGT GCGATCGCTT CTTCCTCGGC TTTGACTGAG TTAGTTAAGG GTTTAACTTT AGATGCAGCG CTGAAAGTTA CCAATAAGGA GATTGCTGAA TACCTGGGGG GATTACCAGA AGCCAAGATG CACTGTTCGG TAATGGGGCA AGAAGCTTTA GAAGCAGCGA TTTTCAAATA TCGAGGTATT CCTGTAGCTG CTCATGATGA TGATGAAGGG GCGTTAGTTT GTCGCTGCTT TGGAATCAGC GAGTCTAAAG TTCGCCGTGT GATTCGGGAA AACAACCTCA CCACTGCCGA ACAGGTAACA AGTTATATCA AAGCTGGTGG CGGTTGCGGT TCTTGTCTAG CTGATATCGA TGACCTCATC TCTGCGGTTA TCAAGGAATC AGCACCTGTG GGTACTAGCT ACAAATTAAG TACACAAATT GCCGCTACTA CTCAGAAACA ATCCCCACGA CAGCTAACAA CTGTCCAAAA AATCGCCTTG ATTCAAAAAG TTTTGGATGA AGAAGTTAGA CCACTACTGA TTGCTGATGG GGGAGATATC GAACTGTACG ATGTGCAAGG AGATAACGTC CAAGTAGTAT TGCAAGGTGC TTGTGGTTCT TGTCCTAGCA GTACCGCCAC CCTCAAAGTT GCCGTTGAAG CCAAATTACA AGAGCGTGTT AGCCAAAGCT TGCGAGTAGA AGCAGTTGAC CCATTATTCA GTGTCAGTAG AGCTAGATAA
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Protein sequence | MWEYTEKVLE LFYNPKNQGA IADSNEAGVA VVFGEVGSIA CGDALRLHLK IEVDTDKILD ARFQTFGCTS AIASSSALTE LVKGLTLDAA LKVTNKEIAE YLGGLPEAKM HCSVMGQEAL EAAIFKYRGI PVAAHDDDEG ALVCRCFGIS ESKVRRVIRE NNLTTAEQVT SYIKAGGGCG SCLADIDDLI SAVIKESAPV GTSYKLSTQI AATTQKQSPR QLTTVQKIAL IQKVLDEEVR PLLIADGGDI ELYDVQGDNV QVVLQGACGS CPSSTATLKV AVEAKLQERV SQSLRVEAVD PLFSVSRAR
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