Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4238 |
Symbol | |
ID | 3680944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5316160 |
End bp | 5317113 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637719586 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_324732 |
Protein GI | 75910436 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCAAAC TAATTTTACC TGTAGAGCTT GCTAATGAGA TTTCCCCACG GCTACCATCA GATACAAAAT TTGTGCAGGT AGATAGTGAT GGTAATTTTG ATGGTGATGC TAGTGATGCA GAGATTTACC TCAACGGCTT TAAATTGAAA CCAACGACTT TACATAAAGT TCTAGAGGCT GCCCCTGGAA TACGTTGGCA ACAGACACCT AGTGCTGGTG TGAATCACAT TCTCACACCC ATTTTTCTGG AACATGATAT TATCCTCACC AATGGCGCGG GGGTTCATGC AATTCCCATT TCCGAGTTTG TCTTAAGTTT GATCCTTTAT CACGCCAAAC AGTTACGACA ACTGCAAGCT GCTCACGATC AACGCATTTG GCGAAAAAGC TGGTTGGTAC TACCAGAGTT AGCAAAATCA ACAGTATTAA TTCTCGGTAC TGGGAATATA GGTCAAGCGA TCGCATCTCG TCTTAAAGCA TTTGGGGCGA TAGTTTGGGG TGGTCGTCGT CGCCCTGAAC CTCTAGCTAA TTTTGATAAA ATCTTTGTTG GCAATGAATG GCACGCATTG TTACCAGAAG TTGACTATCT AGTTGTAGCC ACACCTCTGA CACCAGAAAC TAAAGCCTTA ATTGATGAAG AAGTACTGCG ATCGCTACCT AGTCATGCTT ATTTAATTAA CGTCGGTCGT GGTGCAGTTG TAGACGAATC AGCCTTAACT AAAGCCCTCA CCGAAGGTTG GATTGGAGGT GCAGGATTAG ACACAGTTTC TATTGAACCT TTACCACCCG AAAGTCATTT ATGGTCTTTA CCCAACCTCT TTATTACACC CCATACATCC GCAATTTCCC CAGTATTAAA AGAACGCATC GCTACCTTAT TTCTCGATAA TCTAGAGCGT TACCGTACTG GTCAGTCTTT ACGAAATATA GTCGATAAGC AAGCAGGATA CTAA
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Protein sequence | MVKLILPVEL ANEISPRLPS DTKFVQVDSD GNFDGDASDA EIYLNGFKLK PTTLHKVLEA APGIRWQQTP SAGVNHILTP IFLEHDIILT NGAGVHAIPI SEFVLSLILY HAKQLRQLQA AHDQRIWRKS WLVLPELAKS TVLILGTGNI GQAIASRLKA FGAIVWGGRR RPEPLANFDK IFVGNEWHAL LPEVDYLVVA TPLTPETKAL IDEEVLRSLP SHAYLINVGR GAVVDESALT KALTEGWIGG AGLDTVSIEP LPPESHLWSL PNLFITPHTS AISPVLKERI ATLFLDNLER YRTGQSLRNI VDKQAGY
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