| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4225 |
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| Symbol | |
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| ID | 3680931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5295487 |
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| End bp | 5298084 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719573 |
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| Product | Type I secretion system ATPase, HlyB |
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| Protein accession | YP_324719 |
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| Protein GI | 75910423 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAGCTG CCATACCTTG GAATCAACCG CCTCTCAATT GGCTCACCTC CGAACAAAGA
TCCCTTTTAG AAGAACGTTT AGAAATCCGT CGTTATCGAC TAGGAGAAAA AATCTGGTCA
AGCGAAGCGG GTGGTTATCA GTTTTTCATT GTGGCTGGGA AAGTCCGCTT ACGGGAGGAA
GGAAGCGGTC AATCTTTAGC TGCTATACAA ATGGGCGATT GGTTTGGTGA CTTACAAAAG
CTACCGGGAG AATACAAAGC TGTAGCTGCT AGTAAGGAAG TGATAGTGGC TTGTTGGGAT
ACCCATCTGT GGGCGCAAAT ATCTACTCCC GCGATGGAAG ATTTTTGGCT GGGATTGGCG
AAACAAGAGC ATACTGAGAT GGAGAACGAG GTTACATCCG TCCAGTCTCC TGCTTTGCAA
CAACCACTTA CGCCTCCAGA ACAAACTCCC CAAATTCCTC CACCTGTAAC CCTGAGTTAT
CCTTTTGTTA GCAGTTGGAA TACGGGTGCG GCTTGTTTAA CAATGGCAGC CCAACATCTG
GAAAATGCGG TGAATTTGGA ATGGGTACAA CGCCAACTGC GGGGGCAAAG TCCTAAACAA
GTGGTAGAAG CTGGAGAAAA GTTAGGCTTG GTACTGCGAA GATTGCAAAT GACTTGGGGT
GAGTTGCGTC AGCTGACTTT CCCAGCTTTG TTGCAGTTAC AAGCCGAGTC TATGCCTGAT
CCTTCTTGGG TGATCGCTTA TGGACTAAAA GGCGATCGCT TAATTATTGC TAATCCCTTA
AATCCTGATA ATCTTTGTGA AAGTCTACCA GAATCAGTAG TGGAACAATG CTGGGATGGT
CAGTTGTGGC AAGTAGAACT GATATCTAAG CAGGAAAAAT TTAACCTGAG TTGGTTCACC
CCAGCAGTTT GGAAATATCG CAAACTTTTA GCAGAAGTAT TATTAGCGTC TTTTACCTTG
CAACTATTGG GTTTAGGTAC ACCACTAATT ACCCAAGTTG TCATTGATAA GGTGATGGTA
CAGGAGAGTT TACCAACTCT CGATGTTATG GCGATCGCAC TTTTGGCGAT CGCTGTATTT
GAATCAATAT TGGGGATTCT GCGGTTATTT ATCTTTACTC ATACAGCCAG ACGCTTAGAT
TTAAGCTTAT CAGCACAATT ATTCCGCCAT TTGATGCGCC TACCCTTGGC TTATTTTGAG
TCACGGCGTG TAGGGGATAC CGTAGCCAGG GTGCAGGAAC TAGAACAAAT TCGCCAGTTT
CTCACAGGTA CAGCCTTAAC GGTAATTTTA GATAGCATCT TTGCCGTTGT GTATTTGGCA
TTGATGTTTT ATTACAATAT TCCTCTCACT TTTGTGGCGT TAGCGGTGCT GCCCTTATTT
GCCACACTGA CCATAGTTGC TACACCGATT TTACGTAACT GGTTGAACGA AACCTTTAAC
CGCAGTGCCG ACAGCCAATC ATTCTTAGTA GAAACGGTTA CAGGTATCCA CTCTGTCAAA
GCTCATGCAG CTGAATCAGT AGCACGCGAT CGTTGGGAAG GCTTATTTGC TCGTTTCGTG
CGTACTGGTT TCAAAGCTTC CACCACATCC AACATTAGCA GTAATATTGG GGACTTTCTC
ACTAACTTTT CCTCCCTATT AATTCTGTGG TTTGGGGCAA AATTAGTCAT CGACCAAAAA
CTAACAATTG GGCAATTGGT AGCCTTTCAA ATGCTTTCTG GTAGAGTGAC AGGCCCACTT
TTACGCCTAG TGCAGTTGTG GCAAAACCTG CAACAAGTCC TACTTTCCGT AGACCGGATT
GGCGATATCC TCAACGTTGC ACCAGAAGCA GAGATGGGGA CTGGCTTAGT TCTACCGCCC
CTAAAAGGTC AAGTTAGTTT TGAGCAAGTC TTTTTCCGCT ACAAAACCAA TACAGAACCA
GTACTGCGAG GGATTTCCTT TAATGTAGAA CCGGGACAGT TTGTAGGAAT TGTTGGGCGC
AGTGGTTCTG GGAAAAGTAC CCTATCCAAG TTGTTACAAA GGCTTTATCA AATTGAATCA
GGACGCATTC TCATTGATGG TTTTGATATC AAAAGTGCTG ATTTGTCCTC CCTGAGACAA
CAAATAGGCG TAGTTCTTCA AGAAGACTTC TTATTTAACG GTTCCATCTT GGAGAATATC
ACCTTGGGAA ATCCCGATAT TACTGCCGAG CAAGTAGTAG AAGCCGCTAG ACTAGCTGTA
GCCCATGACT TTATCAGTCA ATTGCCCTAC GGTTACGAAA CTAACGTAGG AGAGCGGGGT
ACAGCTTTAT CTGGAGGACA AAGACAACGC ATTGCTTTAG CCAGGTTGTT TCTCTGTGAT
GCGCCGATTT TAGTATTAGA TGAAGCGACC AGCGCTTTAG ACAGTGAAAC AGAACAGCAA
GTGTTACAAA ATCTGCAAAA GATTTCTGCC AACCGCACTG TATTTCTGAT TGCTCACCGC
TTTGCACCCT TGAAACGAGC AGATTTGATT CTCGTTTTAG AAAAAGGCGT GATTGCAGAA
CGGGGAACCC ATCCAGAGCT TTTGCAACAA AAAGGCTTGT ATTGGTCACT GTACCAACGT
CAACAAGCCA ACGTGTAA
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| Protein sequence | MLAAIPWNQP PLNWLTSEQR SLLEERLEIR RYRLGEKIWS SEAGGYQFFI VAGKVRLREE
GSGQSLAAIQ MGDWFGDLQK LPGEYKAVAA SKEVIVACWD THLWAQISTP AMEDFWLGLA
KQEHTEMENE VTSVQSPALQ QPLTPPEQTP QIPPPVTLSY PFVSSWNTGA ACLTMAAQHL
ENAVNLEWVQ RQLRGQSPKQ VVEAGEKLGL VLRRLQMTWG ELRQLTFPAL LQLQAESMPD
PSWVIAYGLK GDRLIIANPL NPDNLCESLP ESVVEQCWDG QLWQVELISK QEKFNLSWFT
PAVWKYRKLL AEVLLASFTL QLLGLGTPLI TQVVIDKVMV QESLPTLDVM AIALLAIAVF
ESILGILRLF IFTHTARRLD LSLSAQLFRH LMRLPLAYFE SRRVGDTVAR VQELEQIRQF
LTGTALTVIL DSIFAVVYLA LMFYYNIPLT FVALAVLPLF ATLTIVATPI LRNWLNETFN
RSADSQSFLV ETVTGIHSVK AHAAESVARD RWEGLFARFV RTGFKASTTS NISSNIGDFL
TNFSSLLILW FGAKLVIDQK LTIGQLVAFQ MLSGRVTGPL LRLVQLWQNL QQVLLSVDRI
GDILNVAPEA EMGTGLVLPP LKGQVSFEQV FFRYKTNTEP VLRGISFNVE PGQFVGIVGR
SGSGKSTLSK LLQRLYQIES GRILIDGFDI KSADLSSLRQ QIGVVLQEDF LFNGSILENI
TLGNPDITAE QVVEAARLAV AHDFISQLPY GYETNVGERG TALSGGQRQR IALARLFLCD
APILVLDEAT SALDSETEQQ VLQNLQKISA NRTVFLIAHR FAPLKRADLI LVLEKGVIAE
RGTHPELLQQ KGLYWSLYQR QQANV
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