Gene Ava_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4216 
Symbol 
ID3680960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5286842 
End bp5287705 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content52% 
IMG OID637719563 
ProductFHA domain-containing protein 
Protein accessionYP_324710 
Protein GI75910414 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000473857 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCT GTCCAAATTG CAACCACCCC AATCCAGACG GCGCTGTCCA ATGTGAAGCT 
TGCTACACGC CGTTACCCGC CACCAGTAAT TGTCCCAACT GTGGCGCAAC TGTCCAATCT
GATGCTGCTT TTTGTGGTCA GTGTGGCTTT AACCTGCACT CAGTCGCCGC GCCTGCTGCT
ACTGTCGCTA CAGTCGCCCC TGATGTTCCA GTGGAACTGC CACCATTAGC TAATCCCGAT
CCGCTTTTAG AATTGTTACA ACCCAATGCC TTAGGCCTTG ATCCGGTTGC TAATGAGACT
CCCCCTGCAC CAGCACCCTT ACCACCTACA GCCGTAGCAG CACCCCCGTC TGCACCTCCT
GTAGTGGTGG AAGTTACACC TGCCCCACCA CCAGCACCAG TAGAAGCAAG TATTCCTACT
CCCCCACCCG AACCCGTAGC GCCCCCAGAA CCAGTTCCAG CAGTAGAAGC ACCAGCACCA
GCACCAGAAA CTGTTGTAGC TGCACCTCCT TCTCCTGCTA GAACCCAATT ACAGCAAATT
ACAGCCCGGT TAGTTCACGT CCAAAGCGAT CGCGAAATAG AATTACCACC CAGCTTATCT
GTGGTTCATA TTGGTAAACC AAACGATCGC ATTCCTCCCG ATGTCGATGT TTCCGGCTTT
GCCAACTCCG AGATTGTCTC ACGGGTACAC GCGGATATTC GCCTAGAAGG TGACGCGCAC
TATATAGAAG ATGTGGGCAG TTCCAACGGC ACTTACATTA ACAATTTACC TCTACTACCA
GGCAATAGAC ACCGCCTCAG ACCAGGCGAT CGCATCAGTT TAGGTAAAGG TGATTTGGTA
ACTTTCCTCT TTAAACTCGC TTAA
 
Protein sequence
MIVCPNCNHP NPDGAVQCEA CYTPLPATSN CPNCGATVQS DAAFCGQCGF NLHSVAAPAA 
TVATVAPDVP VELPPLANPD PLLELLQPNA LGLDPVANET PPAPAPLPPT AVAAPPSAPP
VVVEVTPAPP PAPVEASIPT PPPEPVAPPE PVPAVEAPAP APETVVAAPP SPARTQLQQI
TARLVHVQSD REIELPPSLS VVHIGKPNDR IPPDVDVSGF ANSEIVSRVH ADIRLEGDAH
YIEDVGSSNG TYINNLPLLP GNRHRLRPGD RISLGKGDLV TFLFKLA