Gene Ava_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4195 
Symbol 
ID3680998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5253233 
End bp5255185 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content42% 
IMG OID637719542 
Producthypothetical protein 
Protein accessionYP_324689 
Protein GI75910393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0035841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAGTCT CCAAATCAAA ACGTCTGACA ATTGTCTCGG TTTTTATCAT CTTTATCCTG 
GCTTTCGTTA TTAGTCTCTG CGGTTGGGAA CAGGCGATCG CCGCCCCCAT AATTGGCACA
AAAGAAGAAA TGGGGGCTTG GGAAACTCTA CCTATGCCCC CTCTAGAAGA CAGAATGCAG
TCTGTGCATA CGATACTGCT ACCGAATGGA AAAGTTTTAG TAGTTAATGG TAGTAGTTTT
CGCACCACTC AAGTAAAAGA ACAAGAGAAC GTCGATCTGG TTGAGGGAGT TGATGTCAGA
AATTATGATG TCATCAATAA TACAGGTCTT CTCGATCCTG TAACTGGAAA ATTTGAGCGC
ATTCCCTCCC CACCATCTAT CCAGGCTGGG GAAACCAATG ATTTATTCTG CACCGGACAT
CTACAACTAT CCAACGGTAA CATTCTTTTT GTCAGTGGAA CTGGGCGCTA TTACCCAGGA
GGTGCATTTA CAGGTAATAG ACAAATCAAC CTGTATAACT GGAAAACCGG AACGTGGTCG
GCGCTAAAAC CACTCAAACA AGGAAGATGG TATCCCAGTT TGATTTCCCT TGCTGATGGT
AAAGTTGTCA TCTTTTCAGG ACTAAAAGTT GATGCGCCTA ATCAAATCAA TCCCACTTTA
GAAATCTACG ATCCAAAAAC AGAAAAGCTC CAGTACATCG ACCTCACAAC TGTCAAGAAT
AGTCCTTTCA ATACCAAACT CAAAGATGTA GATAGCTACG ATAGTATAGA CCTCTATCCT
CGCGTCTTTC CTACTGCTGA TGGTAGACTT TTAATTACCG GAGACGAGGC TGGTATTGCT
GGGGTTTTAG TCCCACATAG CAGCAAAAAA AGCTATTTAA TGTCTATCAA GGAGAATACA
GAAGGTACAT TATCTGTCAG CTTTGAAGTA GGCCCAGATA GAGCAGAAAG CTCTAAAGCC
TATGGAACAG CCCTACAAGT TCCCAACTCA GAAGATGTCT TACTTCTTGG TGGAATTATC
GGCACTAACA GCATCAACTT TGGGCGGTTA AATAATACTC AGGGTTTCCC ACCAGGATCA
AGAGTCGCTA CTAGTTTACA GCGTTGGCTA TCTCCGGCAA AAAGTGGTGA AAAGAACGGA
AAGTGGGAAA TAGTGCCAAA CTTTTTAGAT AAGCCCAGAG CTAATCTCCA ATCTGTAATT
TTACCAACGC AGGAAATATT AGTTGTTAAT GGTGGCCAAT ATCCAGAGTA CAAGCCTGTC
TATGAGCCTC TATTGATGAC TGCTGCTCAG GATGCTCCTG GGGGTTATCA AACCAAGCCG
ATGAATCCAG CAAAACTCCC CAGGCTGTAT CATAATGGTG CATTATTATT ACCAGATGCT
CGTGTTTTAG CGATCGGTGG TAATGCGAAC CGAGCCTTAA GGGATGAAGA TGGCACTGTT
CATGTTGATA TATTGCAAGA TGCCAAAACC TATTATAAAT TCGCCGATTT GAGAGATAAA
TCTGGGCAGA AGAAGGAATT TAATCTAGAA GAATATTATC AAAATCCTCA GAGCTATTTT
GCCAAAGGCG ACGAAGAACC CTTTGTGCCT GCGGAAATTT GGCAAGGAGA AGTATTTAGT
CCTCCTTATC TATTTAAGCC TGGTTCTCGC CCTAAAATTG TTAAAGCTCC TAGTAGTTTG
GCATACAGTC AATCTAATAC GATATCTGTC AAGAATGCGA CTCAAGATGG TTCTCTAGTC
CTGGTAAAAC TGGGGGCAGT AACTCACTCT TTTGATTATG GACAACGTTT AGCACAATTG
CCTATAGAAA ATGTTGTTTT AGCAGATGAG TCTTCCATCA GCTTTAAAAC TCCAGAAAAT
AAAAACCTTT ATCCTCCTGG GTATTACATG ATGTTTTACC TCAACAACGT AGGCAAGCCT
TCCTTGGCGA AGATAGTCAA GCTTGCAGCT TAA
 
Protein sequence
MIVSKSKRLT IVSVFIIFIL AFVISLCGWE QAIAAPIIGT KEEMGAWETL PMPPLEDRMQ 
SVHTILLPNG KVLVVNGSSF RTTQVKEQEN VDLVEGVDVR NYDVINNTGL LDPVTGKFER
IPSPPSIQAG ETNDLFCTGH LQLSNGNILF VSGTGRYYPG GAFTGNRQIN LYNWKTGTWS
ALKPLKQGRW YPSLISLADG KVVIFSGLKV DAPNQINPTL EIYDPKTEKL QYIDLTTVKN
SPFNTKLKDV DSYDSIDLYP RVFPTADGRL LITGDEAGIA GVLVPHSSKK SYLMSIKENT
EGTLSVSFEV GPDRAESSKA YGTALQVPNS EDVLLLGGII GTNSINFGRL NNTQGFPPGS
RVATSLQRWL SPAKSGEKNG KWEIVPNFLD KPRANLQSVI LPTQEILVVN GGQYPEYKPV
YEPLLMTAAQ DAPGGYQTKP MNPAKLPRLY HNGALLLPDA RVLAIGGNAN RALRDEDGTV
HVDILQDAKT YYKFADLRDK SGQKKEFNLE EYYQNPQSYF AKGDEEPFVP AEIWQGEVFS
PPYLFKPGSR PKIVKAPSSL AYSQSNTISV KNATQDGSLV LVKLGAVTHS FDYGQRLAQL
PIENVVLADE SSISFKTPEN KNLYPPGYYM MFYLNNVGKP SLAKIVKLAA