Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4195 |
Symbol | |
ID | 3680998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5253233 |
End bp | 5255185 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637719542 |
Product | hypothetical protein |
Protein accession | YP_324689 |
Protein GI | 75910393 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0035841 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAGTCT CCAAATCAAA ACGTCTGACA ATTGTCTCGG TTTTTATCAT CTTTATCCTG GCTTTCGTTA TTAGTCTCTG CGGTTGGGAA CAGGCGATCG CCGCCCCCAT AATTGGCACA AAAGAAGAAA TGGGGGCTTG GGAAACTCTA CCTATGCCCC CTCTAGAAGA CAGAATGCAG TCTGTGCATA CGATACTGCT ACCGAATGGA AAAGTTTTAG TAGTTAATGG TAGTAGTTTT CGCACCACTC AAGTAAAAGA ACAAGAGAAC GTCGATCTGG TTGAGGGAGT TGATGTCAGA AATTATGATG TCATCAATAA TACAGGTCTT CTCGATCCTG TAACTGGAAA ATTTGAGCGC ATTCCCTCCC CACCATCTAT CCAGGCTGGG GAAACCAATG ATTTATTCTG CACCGGACAT CTACAACTAT CCAACGGTAA CATTCTTTTT GTCAGTGGAA CTGGGCGCTA TTACCCAGGA GGTGCATTTA CAGGTAATAG ACAAATCAAC CTGTATAACT GGAAAACCGG AACGTGGTCG GCGCTAAAAC CACTCAAACA AGGAAGATGG TATCCCAGTT TGATTTCCCT TGCTGATGGT AAAGTTGTCA TCTTTTCAGG ACTAAAAGTT GATGCGCCTA ATCAAATCAA TCCCACTTTA GAAATCTACG ATCCAAAAAC AGAAAAGCTC CAGTACATCG ACCTCACAAC TGTCAAGAAT AGTCCTTTCA ATACCAAACT CAAAGATGTA GATAGCTACG ATAGTATAGA CCTCTATCCT CGCGTCTTTC CTACTGCTGA TGGTAGACTT TTAATTACCG GAGACGAGGC TGGTATTGCT GGGGTTTTAG TCCCACATAG CAGCAAAAAA AGCTATTTAA TGTCTATCAA GGAGAATACA GAAGGTACAT TATCTGTCAG CTTTGAAGTA GGCCCAGATA GAGCAGAAAG CTCTAAAGCC TATGGAACAG CCCTACAAGT TCCCAACTCA GAAGATGTCT TACTTCTTGG TGGAATTATC GGCACTAACA GCATCAACTT TGGGCGGTTA AATAATACTC AGGGTTTCCC ACCAGGATCA AGAGTCGCTA CTAGTTTACA GCGTTGGCTA TCTCCGGCAA AAAGTGGTGA AAAGAACGGA AAGTGGGAAA TAGTGCCAAA CTTTTTAGAT AAGCCCAGAG CTAATCTCCA ATCTGTAATT TTACCAACGC AGGAAATATT AGTTGTTAAT GGTGGCCAAT ATCCAGAGTA CAAGCCTGTC TATGAGCCTC TATTGATGAC TGCTGCTCAG GATGCTCCTG GGGGTTATCA AACCAAGCCG ATGAATCCAG CAAAACTCCC CAGGCTGTAT CATAATGGTG CATTATTATT ACCAGATGCT CGTGTTTTAG CGATCGGTGG TAATGCGAAC CGAGCCTTAA GGGATGAAGA TGGCACTGTT CATGTTGATA TATTGCAAGA TGCCAAAACC TATTATAAAT TCGCCGATTT GAGAGATAAA TCTGGGCAGA AGAAGGAATT TAATCTAGAA GAATATTATC AAAATCCTCA GAGCTATTTT GCCAAAGGCG ACGAAGAACC CTTTGTGCCT GCGGAAATTT GGCAAGGAGA AGTATTTAGT CCTCCTTATC TATTTAAGCC TGGTTCTCGC CCTAAAATTG TTAAAGCTCC TAGTAGTTTG GCATACAGTC AATCTAATAC GATATCTGTC AAGAATGCGA CTCAAGATGG TTCTCTAGTC CTGGTAAAAC TGGGGGCAGT AACTCACTCT TTTGATTATG GACAACGTTT AGCACAATTG CCTATAGAAA ATGTTGTTTT AGCAGATGAG TCTTCCATCA GCTTTAAAAC TCCAGAAAAT AAAAACCTTT ATCCTCCTGG GTATTACATG ATGTTTTACC TCAACAACGT AGGCAAGCCT TCCTTGGCGA AGATAGTCAA GCTTGCAGCT TAA
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Protein sequence | MIVSKSKRLT IVSVFIIFIL AFVISLCGWE QAIAAPIIGT KEEMGAWETL PMPPLEDRMQ SVHTILLPNG KVLVVNGSSF RTTQVKEQEN VDLVEGVDVR NYDVINNTGL LDPVTGKFER IPSPPSIQAG ETNDLFCTGH LQLSNGNILF VSGTGRYYPG GAFTGNRQIN LYNWKTGTWS ALKPLKQGRW YPSLISLADG KVVIFSGLKV DAPNQINPTL EIYDPKTEKL QYIDLTTVKN SPFNTKLKDV DSYDSIDLYP RVFPTADGRL LITGDEAGIA GVLVPHSSKK SYLMSIKENT EGTLSVSFEV GPDRAESSKA YGTALQVPNS EDVLLLGGII GTNSINFGRL NNTQGFPPGS RVATSLQRWL SPAKSGEKNG KWEIVPNFLD KPRANLQSVI LPTQEILVVN GGQYPEYKPV YEPLLMTAAQ DAPGGYQTKP MNPAKLPRLY HNGALLLPDA RVLAIGGNAN RALRDEDGTV HVDILQDAKT YYKFADLRDK SGQKKEFNLE EYYQNPQSYF AKGDEEPFVP AEIWQGEVFS PPYLFKPGSR PKIVKAPSSL AYSQSNTISV KNATQDGSLV LVKLGAVTHS FDYGQRLAQL PIENVVLADE SSISFKTPEN KNLYPPGYYM MFYLNNVGKP SLAKIVKLAA
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