Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4154 |
Symbol | |
ID | 3681093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5180577 |
End bp | 5181680 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637719500 |
Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
Protein accession | YP_324648 |
Protein GI | 75910352 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0230431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.542699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATT TTCTATTCCA GCGCATAATA ACCTATTGGC AAAAATTGTT TATTTTCAAA TTTGCTAATC AGAGTCGCTC AATATCTATC GTTCCTATAA AATTTACTGG GACATTTATT ACTGGCTTAT GCCTCAGTCT TTTATTTGCT GCCTGCACAG CTAATAATGC TAGTAATATC ACTACTGTGT CTGCTAATAA TTCAACTCAG AGTAAAGCAT CTGTAGTCAG AATAGGCTAT CAAAAATCAG CAATTCTCTT AAAAAGTAAA GGGCTTTTAG AAAAGCGCTT GCAACCTGAA GGAGTATCTG TTGAATGGAA TGAATTTCCT GCCGGTCCGC AGCTTTTAGA AGCGATGAAT GTCGGTAGTA TTGACTTCGG GCATACTGGA GAATCACCAC CAATTTTTGC TCAAGCAGCC GATGCTGCAA TCACATATAT TGCGGGAATT ATACCCAGTC CAGCTAATTC AGCAATTCTT GTTCCCAAAA ATTCCGATAT CAAAACAGTC AATGATCTTA AAGGGAAAAA AATCGCTTTC CAAAAAGGTT CTAGCGCCCA TTATCTGCTA GTGCAAATTT TAGAAAAAAA CGGACTGAAG TACAGCGATA TTCAACCCAT ATATCTACCC CCAGCCGATG CTCGTGCCGC CTTTGTCAAA GGTAGCATTG ATGCTTGGTC AATTTGGGAC CCCTTTTATG CAGCAGCCGA AAAATCTGCC GATGCTCGTG TGTTAATTGA TGGCACAGGA ATTAATAAGC AGGGAGGATA TTACCTTGCT AGCCGCAAAT TTGCTAACCA GCAACCAGAA ATTATTAAAG CAATACTAGA AGAAATTCAA AATACTGAAC AATGGTCTGA TAAAAATCGC AATGAAGTAG CAGCAACTCT TTCTCCTATC TTGGGCATCG ATTTGGAAAC GATGCAAAGA AGTACTAACA GAAGAAAATT TGGCATCAGA CCAATCACTC CAGAATTAAT TACTCTCCAG CAGGAAGTTG CAGATAAATT CTATGAACTA AAATTAATTC CCAAAGCAAT TGATGTCAAA GAAGCAATGC TTACACCAGC GCAATATGCA GCTTTTGCAC CCAAGAATCC ATAA
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Protein sequence | MLNFLFQRII TYWQKLFIFK FANQSRSISI VPIKFTGTFI TGLCLSLLFA ACTANNASNI TTVSANNSTQ SKASVVRIGY QKSAILLKSK GLLEKRLQPE GVSVEWNEFP AGPQLLEAMN VGSIDFGHTG ESPPIFAQAA DAAITYIAGI IPSPANSAIL VPKNSDIKTV NDLKGKKIAF QKGSSAHYLL VQILEKNGLK YSDIQPIYLP PADARAAFVK GSIDAWSIWD PFYAAAEKSA DARVLIDGTG INKQGGYYLA SRKFANQQPE IIKAILEEIQ NTEQWSDKNR NEVAATLSPI LGIDLETMQR STNRRKFGIR PITPELITLQ QEVADKFYEL KLIPKAIDVK EAMLTPAQYA AFAPKNP
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