Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4151 |
Symbol | |
ID | 3681090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5177752 |
End bp | 5178579 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637719497 |
Product | ABC transporter-like |
Protein accession | YP_324645 |
Protein GI | 75910349 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000107642 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.126355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCAAAAT CACTTGCCAG TAGCCCTAAC GCAGTGATTT TAGAAACCCA AGGACTGACG CGTTACTTTG GTAAAGCGGT TGCTGTCAAA GATTTAAGTA TCACAGTCCA ACAAGGTGAG GTCTTTGGCT TACTTGGCCC TAACGGCGCA GGTAAAAGTA CAGCAATGAA GATGTTGACT ACTCTATTGC CCCTAAGTGC AGGGAGAGCA ACTATAGCTG GTTATGACGT AACTCACCAG GCGGCGGCTG TTAGACGGCT ATTTGGCTAT GTACCTCAAG CCCTTTCTGC TGATGGTAGT CTCACAGGTT ACGAAAACCT CTTAATTTTT GCCAAGCTAT ACGATATTCC TGTCAAGCAC AGGCAAAGGC GTATTCGGGA AGTGCTGGAT TTCATGGGTT TGCAAGCCGC AGCCCATCGT TTAGTACGTA ACTACTCCGG TGGCATGATT CGCAAGCTAG AAATTGCCCA ATCTATCATG CACCAACCCA AGATTTTGTT TCTTGATGAA CCGACTGTAG GACTAGATCC CATAGCCCGC ACTCAGGTAT GGCAACTTGT GCAACAACTG CGAGCAGATT ACGGCACAAC CATATTTTTA ACCACCCACT TTTTAGAAGA AGCTGATAGT CTGTGTAGCC GAGTGACGAT TATGCAGCAA GGTCAAGTTG TGATCACAGG GGAACCCAGT GATTTAAAAG CTTCTTTAGG TAAGCCCAAT GCAACCTTAG ATGATGTCTT TATTCATTAC ACAGGGGATC AACTAACATC AGGAGTGAAC TATCGTGATA CAGCCAGAAC CAGACGTACA TCTCAACGGT TGGGTTAA
|
Protein sequence | MSKSLASSPN AVILETQGLT RYFGKAVAVK DLSITVQQGE VFGLLGPNGA GKSTAMKMLT TLLPLSAGRA TIAGYDVTHQ AAAVRRLFGY VPQALSADGS LTGYENLLIF AKLYDIPVKH RQRRIREVLD FMGLQAAAHR LVRNYSGGMI RKLEIAQSIM HQPKILFLDE PTVGLDPIAR TQVWQLVQQL RADYGTTIFL TTHFLEEADS LCSRVTIMQQ GQVVITGEPS DLKASLGKPN ATLDDVFIHY TGDQLTSGVN YRDTARTRRT SQRLG
|
| |