| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4131 |
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| Symbol | |
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| ID | 3681207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5145463 |
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| End bp | 5148009 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719477 |
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| Product | filamentous haemagglutinin-like protein |
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| Protein accession | YP_324625 |
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| Protein GI | 75910329 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3210] Large exoproteins involved in heme utilization or adhesion |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.343736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0350194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACT TACAAACAAC AAAAATTTTA TTTTTTTTTA CATTGTGTCT AGTGCTAGAA
ACACCTTTAA AAGGATTAGC ACAAACTCAA CTGAACCCTG ATCATACTCT ACCCACTAAT
GTCAATAGTA TTGGTGGTGT GTACGATATT ACTGGCGGCA ATAGACCGAA TAATGGTGCT
AATCTTTTTC ACAGTTTCCA AGATTTTTCA ATTCAATCAG GAGATACTGC TAGATTTATT
TACGATACAG GAATTAGCAA TATCATCACA CGGATTACGG GAGGGTCACC TTCCCAAATT
AACGGGACTA TTCAAACACT TCTCAATGGT ACTAATAATA TAGGTAATGC CAATTTATTT
CTGATTAATC CACATGGAAT TATCTTTGGT GCAAATGCCA AATTAGATAT AGGCGGCTCA
TTTATTGGGA CTACAGCAGA TAGTATCAAA TTCAATGATG GGAAAGAATT TAGTGCTATC
AACCCTACAG TTAACCCGAT TTTGACTGTT AATGTACCTA TCGGTTTACA ATTTGGTTCT
CACCCCACCA GCACCATTCA AGTACAAGGT TCAGGCAACA ATTTCCAACT CAATCCTGAT
TTATCTGTTG ATAACAGTAA CCGTCCATCA GGATTGAGCT ATCAAACCCC AAATGCTCAG
ACTTTAGCAC TAGTTGCAGG CAAGGTGGAA TTAGCTGGAG GAAATATTAC TGTACCCCAG
GGAAGAATTG AATTATGGTC TGTGAATAGA GGTGAGGTGA CAATCACCAA TCCTAGTGGA
CATCTGCAAC TACAACCCAC ACCAGGAATT AGTTACGGTA ATGTTGACCT TGTAAATGCT
GCTTCTGTAG ATGCTAGTGG TAATAGTGGT GGTTCTATCG AGGTGCGAGG GCAAAATGTG
ACTCTCGACA ACGGTTCAGT CATAGTTACA GATACCACAG GTAGCGGTTC TGGAGGGATA
TTGAATATAT CTGCATCAGA GGTATTGACT GTTAAAGGCT TTGTTTTGAA CCCTAATAAC
CAGATATCTA GCGGTATATC AGCTGATGTT GCTTCAGGTG CAAGTGGAGA AGGAGGTAAA
GTCACAGTTA CTACAAAAAC TTTGCAAGTG AGCAATGGGG GTCAAATTTC CAGTGGTACT
TTTGGCACTG GAAATGCTGG AGAATTGAAC GTTACAGCTC AGGATGTGCA GATACGTGGT
ATTTCTCTCT TTGGGCCTAG TGGTTTATTT GCTCCTGTTG CTCCTGGCGC AAGAGGAAAC
GGGGGAAACT TAACAGTTGA AACTAATAAA TTACAAGTTA CTGATGGTGG ACAGATATTT
ACTAATACCT TGGGCTTTGG TAAAGCTGGT GACTTGAAAA TTCTCGCTCA AGATGTAGAG
GTCAGTGGTG GGACAGAATT TGGGCCTAGT ACCATTGCAG CCACAGTCCA AAAGATATTG
AGTATTCCAG AGCCAGCTGC AACTTTTTTA GGCGCTGGTT TTGGTAATGC TGGTAATTTA
ATCATTGAAA CCAGCAATTT ACGAGTTACT GACGGGGGTC AGATTGCTGT TAGCACCTCT
GGGAATGGCT CGGCTGGTAA CATGACAATT AATGCTAACT CAGTAGAATT AGCAGGTACT
AATCAATTTG GTCGTAGTGG TTTATTCGCT AATGCTATTG TTGGTAAAGG TCAAGGTGGC
GATGTTAATA TCAGTAGCGA TCGCTTAGTT GTTCGTGATG GTGCAACTAT TAATGTCAGT
AGTTTCCTTA GTAGAGACCC AGGAAATCTG CGGGGTTTAG CTGGAAAAGG GGCGGCGGGA
AATATAAATC TCAATTCTGC TGATATTTTA CTAGCAAATC AAGGGATCAT TACTGCTGAT
ACTAATGCCG GGGATAAAGG CAATATTACG ATTCAATCGG ACACCCTGCA AATACTACGT
GGTAGTCAAA TTAGCACCAA TGCGCGCAAT AGTGCAGTTG GGGGAAATAT TAATATTACT
ACCAATACTT TAGTTGCTTA CGAAAATAGT GATATTAGTG CTAATGCTCA AAAAGGTTTT
GGTGGTAGGG TAGTTGTCAA TGCCAAAGCA GTTTTTGGGA TTCAATTCCG TCCCCAACCG
ACTCCAGACA GTGACCTGAC GGCTTCTTCT GATTTGGGTG CGGAGTTTAA TGGTACTGTA
GAACTGAATA CACTAGATGT TGATCCTACT AGCGGATTAG TGAAGCTACC GACTAACTTT
AGCGATCGCT CACAGCAGAT AGCTAGTGGT TGTAGTGTGA CGCAAAAGAA TCGTTTCGTT
GTTAGTAACC GTGGTGGCTT ACCCACCAAC CCTACCGATA CCCTCAGAGG TGAGATAGTT
TGGTATGATG TCCGTGATTT ATCCAATGAA GTAGCTAACT CAACAGCAGG CAGTAACTAT
CAAACTGTTA ATAATCAAGA ACCAATTGTT GAGGCTCAAG GATTAATTGT TGGTGCAGAT
GGTACAATGC AGCTACTAGC ATCCATCCCA CAGGTAACGC CTCTCACTCC GTGGCAAGTA
TCACCTTCAT GTGATGTTAA ACCCTAA
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| Protein sequence | MFNLQTTKIL FFFTLCLVLE TPLKGLAQTQ LNPDHTLPTN VNSIGGVYDI TGGNRPNNGA
NLFHSFQDFS IQSGDTARFI YDTGISNIIT RITGGSPSQI NGTIQTLLNG TNNIGNANLF
LINPHGIIFG ANAKLDIGGS FIGTTADSIK FNDGKEFSAI NPTVNPILTV NVPIGLQFGS
HPTSTIQVQG SGNNFQLNPD LSVDNSNRPS GLSYQTPNAQ TLALVAGKVE LAGGNITVPQ
GRIELWSVNR GEVTITNPSG HLQLQPTPGI SYGNVDLVNA ASVDASGNSG GSIEVRGQNV
TLDNGSVIVT DTTGSGSGGI LNISASEVLT VKGFVLNPNN QISSGISADV ASGASGEGGK
VTVTTKTLQV SNGGQISSGT FGTGNAGELN VTAQDVQIRG ISLFGPSGLF APVAPGARGN
GGNLTVETNK LQVTDGGQIF TNTLGFGKAG DLKILAQDVE VSGGTEFGPS TIAATVQKIL
SIPEPAATFL GAGFGNAGNL IIETSNLRVT DGGQIAVSTS GNGSAGNMTI NANSVELAGT
NQFGRSGLFA NAIVGKGQGG DVNISSDRLV VRDGATINVS SFLSRDPGNL RGLAGKGAAG
NINLNSADIL LANQGIITAD TNAGDKGNIT IQSDTLQILR GSQISTNARN SAVGGNINIT
TNTLVAYENS DISANAQKGF GGRVVVNAKA VFGIQFRPQP TPDSDLTASS DLGAEFNGTV
ELNTLDVDPT SGLVKLPTNF SDRSQQIASG CSVTQKNRFV VSNRGGLPTN PTDTLRGEIV
WYDVRDLSNE VANSTAGSNY QTVNNQEPIV EAQGLIVGAD GTMQLLASIP QVTPLTPWQV
SPSCDVKP
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