| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4110 |
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| Symbol | |
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| ID | 3681498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5123111 |
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| End bp | 5125300 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637719457 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_324605 |
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| Protein GI | 75910309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.110256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCC TGGGTATTGG TAGTAGTGAT TCCACTTATA TATTTACAAC AGGAGAAGCA
AAACTCTGGA TTTTGTTAGT AGGTATTAAC GAATACCAAG ATGTGAGTTT ACCTAATTTA
CGCTATCCGG CAGGTGACTG TGAAGCTTTA GGAGACGCAT TAGCAAAAGT TACACAGAGA
TTTTTACGTA AGGAAGTGAT CATTCATCAT GATTTTATGG AAGACACTCC TACCTTAAAA
ACGGTCTGTC GGAGTCTGGA ACGAATTGTT TCAAAAGCTA AACCTACTGA CTCAATATTT
TTATATTTTT CTGGTCATGG AATGTTAGAG CCAGATACTC AAGATGTTGT GCTGTGCTTA
TCAGATACCA GACAAGAAAA CCTGCCAGAT ACAGGATTAC CTGTGCAAAA ACTGTTACAA
ATCTTAGAGA CTAGTCGTAC CAATCAACAA CTAGTTTGTC TAGATACCTG TCACAGTGGC
GATATGAAAA TGCCTCAAAT AAACAACGCT AGCTTCAGAG AATTAAACAT CACTGAGACA
TTACTGAACC CCGCAACAAA TCTTGTGAAT GCTTTGCGAA AACGCGCTAG TCGTAGTAAA
GGATTTTGTG CTTTGTTATC TTGCGATCAA GGACAGCAGT CTTGGGAGTT TCCGGAACTG
GGACATGGAG CCTTTACTTA TTACTTAGTA CGGGGCCTAT TGGGTGAAGC TGCTGATTCT
CATGGCGTTA TTGAAGCAGA TGGTTTATAT AAATATGTTT ATCGCCAGAC ATTACAATAT
ATTGATAAAT TAAATCACCA ACTGCGTCTG ATAAATAAAC AAAAACTCAA CCGTGGGGAC
AGAAAATTAT ATCCAGAATA TCCTTTGCAA ACGCCTAAAA GAATTGTTGA AGGAGTAGGA
GAATTTATTT TAGGATTCAA ATATGATGCA GATGAATCTC ACCAACAGCG ACGAGCTTTA
GTTATAGATG GACTCTCAAA CAAGATAAAT ACTGATTTGA TTGATATATT TGCTCATGCT
GGTGATTTTC AAGCCGAGTG TTGGCATCAA CAAAGCAAAT CTTGGTCAGA TATAGAGATA
AGAATCAAAG GGTTTCTAGA TAGAGATAGT AAATCAACCA TAAAATCTCC TCCTTATTTA
GAATTAATCA AACCTACACC AACTTGCTTA CTTTATTTAC GTGGGTACAT TGAAGAAAAC
GAAAATGGAG AAGCTTGGTT CATATTAGGC AATGGAGTAC TTCTTAGCCG TTCTTACTTA
AAACAACAGC TACAACGTGC AACTAAGACT CAACAAATAA TCATTTTAGA TTGTCCTAAC
ACTAATTCCC TCAAAAAATG GATAGAATAT TGCCAATGTG GTACAGAGTA TGGGCAATGT
ATAATTGCAG CTACTTCCAC AATAGATAAA TCAGAATTAT TTTGCCAAAC ACTCCACAAC
ATCCTTGCTA GTGTAAATGT ACAAGTTGGT TTGTCAGTTT CTAAATTGAT TGCTGAATTA
CAAAAACGTT TACCAAAACA AGATGTCAGA CTTGATTTTT GGATATCAGA AACGCAAACG
ATAATTGATA TTTTACCTAG TAAGAATTAT CCAAATTTTT CCCAAAGACC TTATCTCCAG
AGAAATCAAC AGGAGCAACA AAAAAAATTC CCATCTCACC ATCTTGATGA TGTGACAGAA
ATTCCCTCTA CTACCTTACC TTTACCATCA CCTATTCCTG TTACTAGTGA AGCTATAGAG
ACAGTAAAAC CTCAACTTAA TTTGCTCCTT AGTTCAGAAC AGCTTACAGA ATTAGAAAAT
TTACTGAAAC AATCATTAGG CATAGTTGCG CCTATAGTTT TAAAAAAAGC TTTAAAAGTA
AATAATGGTA CAGAATTAAT AAGAACATTA GCTAATTATT TACCACATAA GGAACAAGAA
AAATTTAAAG AACAAGCATT ATTTATATTA AATAAAAAAA GTAGTTTTTC TCTCAGTAGA
TCGGCAAATG AACAAACAAT AAATGCAGCT TTTCTTGGTA AATGTGAACG TGAGTTAACC
AATTTAATTG GCTCAGATGC TAGATTGAAT ATTCAACATA TTTTAGAATC TCATACCCAA
ATCACTTCCA AAGAATTGGT AGATAAATTG ATAGCCAAAA TTCCCGATCC ACAGCTAGCT
TTAAAGTTTA AACAGCGTAT ATGGGGTTGA
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| Protein sequence | MSPLGIGSSD STYIFTTGEA KLWILLVGIN EYQDVSLPNL RYPAGDCEAL GDALAKVTQR
FLRKEVIIHH DFMEDTPTLK TVCRSLERIV SKAKPTDSIF LYFSGHGMLE PDTQDVVLCL
SDTRQENLPD TGLPVQKLLQ ILETSRTNQQ LVCLDTCHSG DMKMPQINNA SFRELNITET
LLNPATNLVN ALRKRASRSK GFCALLSCDQ GQQSWEFPEL GHGAFTYYLV RGLLGEAADS
HGVIEADGLY KYVYRQTLQY IDKLNHQLRL INKQKLNRGD RKLYPEYPLQ TPKRIVEGVG
EFILGFKYDA DESHQQRRAL VIDGLSNKIN TDLIDIFAHA GDFQAECWHQ QSKSWSDIEI
RIKGFLDRDS KSTIKSPPYL ELIKPTPTCL LYLRGYIEEN ENGEAWFILG NGVLLSRSYL
KQQLQRATKT QQIIILDCPN TNSLKKWIEY CQCGTEYGQC IIAATSTIDK SELFCQTLHN
ILASVNVQVG LSVSKLIAEL QKRLPKQDVR LDFWISETQT IIDILPSKNY PNFSQRPYLQ
RNQQEQQKKF PSHHLDDVTE IPSTTLPLPS PIPVTSEAIE TVKPQLNLLL SSEQLTELEN
LLKQSLGIVA PIVLKKALKV NNGTELIRTL ANYLPHKEQE KFKEQALFIL NKKSSFSLSR
SANEQTINAA FLGKCERELT NLIGSDARLN IQHILESHTQ ITSKELVDKL IAKIPDPQLA
LKFKQRIWG
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